RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 CRIPAKQ8N1N5 446 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 PPM1KQ8N3J5 372 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 SHC3Q92529 594 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 JAKMIP2Q96AA8 810 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 IMPG2Q9BZV3 1241 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 MFAP3P55082 362 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
PTPN20-206ENST00000395722 RAPGEF1Q13905 1077 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 HGSNATQ68CP4 663 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 ELMO3Q96BJ8 720 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN20-206ENST00000395722 MIOSQ9NXC5 875 aa16.26■□□□□ 0.19
PTPN20-206ENST00000395722 TTC3P53804 2025 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.25■□□□□ 0.19
PTPN20-206ENST00000395722 PIRO00625 290 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 OFD1O75665 1012 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 SKILP12757 684 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 LRPAP1P30533 357 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 SOX5P35711 763 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 STAT1P42224 750 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 AFF1P51825 1210 aaKnown RBP16.25■□□□□ 0.19
PTPN20-206ENST00000395722 CUL2Q13617 745 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
PTPN20-206ENST00000395722 ZNF699Q32M78 642 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 C9orf57Q5W0N0 161 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 CNKSR3Q6P9H4 555 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 TMTC1Q8IUR5 882 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 LRRC52Q8N7C0 313 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 UBR7Q8N806 425 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 NIF3L1Q9GZT8 377 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 SLC38A7Q9NVC3 462 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.25■□□□□ 0.19
PTPN20-206ENST00000395722 AGAP1Q9UPQ3 857 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 MICAL3Q7RTP6 2002 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 LTBP2Q14767 1821 aa16.25■□□□□ 0.19
PTPN20-206ENST00000395722 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
PTPN20-206ENST00000395722 TBXAS1P24557 533 aaPredicted RBP16.24■□□□□ 0.19
PTPN20-206ENST00000395722 PRKCIP41743 596 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 FMNL3Q8IVF7 1028 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 FAM71AQ8IYT1 594 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 RPS6KC1Q96S38 1066 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 CHP1Q99653 195 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ZNHIT6Q9NWK9 470 aaKnown RBP16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ZKSCAN5Q9Y2L8 839 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 PPEF2O14830 753 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 NRDCO43847 1150 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 THP07101 528 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 KRT19P08727 400 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 RAG1P15918 1043 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ACO1P21399 889 aaKnown RBP16.24■□□□□ 0.19
PTPN20-206ENST00000395722 KCNJ6P48051 423 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 SCNN1GP51170 649 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ARHGAP44Q17R89 818 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 CLLU1OSQ5K130 101 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 DEFB128Q7Z7B8 93 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 HPDLQ96IR7 371 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ARID3AQ99856 593 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 BCO2Q9BYV7 579 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 PRDM5Q9NQX1 630 aaPredicted RBP16.24■□□□□ 0.19
PTPN20-206ENST00000395722 ARHGAP20Q9P2F6 1191 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 CNTN6Q9UQ52 1028 aa16.24■□□□□ 0.19
PTPN20-206ENST00000395722 SCN1AP35498 2009 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
PTPN20-206ENST00000395722 FERP16591 822 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 ASPAP45381 313 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 GRIK3Q13003 919 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 ASIC2Q16515 512 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 ZNF667Q5HYK9 610 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
PTPN20-206ENST00000395722 EVI5O60447 810 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 SERPING1P05155 500 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
PTPN20-206ENST00000395722 GLB1LQ6UWU2 654 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 SSU72P8A0A1W2PR75 194 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 PFKMP08237 780 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 CSF2RAP15509 400 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 MYO1EQ12965 1108 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 RAD9BQ6WBX8 426 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 TMEM199Q8N511 208 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 SYT11Q9BT88 431 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 FAM124BQ9H5Z6 455 aaPredicted RBP16.22■□□□□ 0.19
PTPN20-206ENST00000395722 GOLGA2P5Q9HBQ8 144 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
PTPN20-206ENST00000395722 POLIQ9UNA4 740 aa16.22■□□□□ 0.19
PTPN20-206ENST00000395722 BZW2Q9Y6E2 419 aaKnown RBP16.22■□□□□ 0.19
PTPN20-206ENST00000395722 TDRD15B5MCY1 1934 aaKnown RBP16.21■□□□□ 0.19
PTPN20-206ENST00000395722 GFPT2O94808 682 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 RPL9P32969 192 aaKnown RBP16.21■□□□□ 0.19
PTPN20-206ENST00000395722 PNPLA4P41247 253 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms