RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 LINC01553A4QN01 128 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 SGSM2O43147 1006 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 DUSP11O75319 330 aaKnown RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 CNMDO75829 334 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 GJB6O95452 261 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 SUPT20HL2P0C7V6 817 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 ZEB1P37275 1124 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 BCL6P41182 706 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 BUD31P41223 144 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 GYG1P46976 350 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 RGS3P49796 1198 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 TESK1Q15569 626 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 PLEKHG6Q3KR16 790 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 MRM1Q6IN84 353 aaKnown RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 LBX2Q6XYB7 198 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 ZC3H18Q86VM9 953 aaKnown RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 ADGRG2Q8IZP9 1017 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 CARFQ8N187 725 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 Q8N1Y9 231 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 KREMEN2Q8NCW0 462 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 FAM84BQ96KN1 310 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 RTP3Q9BQQ7 232 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 SPATA25Q9BR10 227 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 IDI2Q9BXS1 227 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 NTMQ9P121 344 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 TMEFF2Q9UIK5 374 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-202ENST00000395548 R4GN57 208 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 X6R8D5 127 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 OTOGLQ3ZCN5 2332 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 A0A1B0GTL3 188 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 PLIN1O60240 522 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 DDX58O95786 925 aaKnown RBP6.54□□□□□ -1.36
AP3S1-202ENST00000395548 ASNSP08243 561 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 CELA3BP08861 270 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 HOXB7P09629 217 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 FPR2P25090 351 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 SARSP49591 514 aaKnown RBP6.54□□□□□ -1.36
AP3S1-202ENST00000395548 GFRA1P56159 465 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 DLX2Q07687 328 aaPredicted RBP6.54□□□□□ -1.36
AP3S1-202ENST00000395548 CAVIN4Q5BKX8 364 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 UNQ6494/PRO21346Q6UXR6 183 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 MILR1Q7Z6M3 343 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 MIB1Q86YT6 1006 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 CCDC103Q8IW40 242 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 PPIL6Q8IXY8 311 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 RCBTB1Q8NDN9 531 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 RPGRIP1Q96KN7 1286 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 NOX5Q96PH1 765 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 A0A1B0GUL6 1792 aa6.54□□□□□ -1.36
AP3S1-202ENST00000395548 CEP295Q9C0D2 2601 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 LOC400499M0QZD8 3231 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 H3BNC9 293 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 H7BY64 318 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 ENPP3O14638 875 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 GJB5O95377 273 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 S100BP04271 92 aaPredicted RBP6.53□□□□□ -1.36
AP3S1-202ENST00000395548 CSF1RP07333 972 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 NDUFV1P49821 464 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 IFIT5Q13325 482 aaKnown RBP6.53□□□□□ -1.36
AP3S1-202ENST00000395548 LSAMPQ13449 338 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 GPM6BQ13491 265 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 ITGA7Q13683 1181 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 SF1Q15637 639 aaKnown RBP6.53□□□□□ -1.36
AP3S1-202ENST00000395548 PRSS53Q2L4Q9 553 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 NT5DC1Q5TFE4 455 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 CD300LDQ6UXZ3 194 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 TMEM145Q8NBT3 493 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 PPP2R3CQ969Q6 453 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 PLA2G12BQ9BX93 195 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 TRPV6Q9H1D0 765 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 ADAM7Q9H2U9 754 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 MROH8Q9H579 483 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 SPATA6Q9NWH7 488 aaPredicted RBP6.53□□□□□ -1.36
AP3S1-202ENST00000395548 PALD1Q9ULE6 856 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 SORCS3Q9UPU3 1222 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 INSL6Q9Y581 213 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
AP3S1-202ENST00000395548 DDTLA6NHG4 134 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SRRM3A6NNA2 597 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 ARNTLO00327 626 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SLC30A4O14863 429 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 B4GALT4O60513 344 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 KINO60870 393 aaKnown RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 EFCAB14O75071 495 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 EIF3JO75822 258 aaKnown RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 C8BP07358 591 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 FCER1AP12319 257 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 ATF7P17544 494 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 AOC1P19801 751 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 GJA9P57773 515 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 WDR5P61964 334 aaKnown RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms