RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CSF2RAP15509 400 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 ATF7IP2Q5U623 682 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 FAM71AQ8IYT1 594 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 PDCL2Q8N4E4 241 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 LNX1Q8TBB1 728 aaPredicted RBP16.25■□□□□ 0.19
SCAF11-204ENST00000395454 SHC3Q92529 594 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 SEMA4DQ92854 862 aa16.25■□□□□ 0.19
SCAF11-204ENST00000395454 AGO2Q9UKV8 859 aaKnown RBP16.25■□□□□ 0.19
SCAF11-204ENST00000395454 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-204ENST00000395454 FAM189A1O60320 539 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 CAPN15O75808 1086 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 HOXA11P31270 313 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-204ENST00000395454 MATR3P43243 847 aaKnown RBP eCLIP16.24■□□□□ 0.193e-6■■□□□ 12.9
SCAF11-204ENST00000395454 NOTUMQ6P988 496 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 FBXO38Q6PIJ6 1188 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 SV2AQ7L0J3 742 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 DBF4BQ8NFT6 615 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 HELQQ8TDG4 1101 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 CCDC127Q96BQ5 260 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 RPGRIP1Q96KN7 1286 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 ACO2Q99798 780 aaKnown RBP16.24■□□□□ 0.19
SCAF11-204ENST00000395454 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 TCHPQ9BT92 498 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 PACSIN1Q9BY11 444 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 ERVK-5Q9HDB9 667 aa16.24■□□□□ 0.19
SCAF11-204ENST00000395454 UBE2TQ9NPD8 197 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-204ENST00000395454 LRRN2O75325 713 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ITIH3Q06033 890 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ZACNQ401N2 412 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 PLEKHG4Q58EX7 1191 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TWF2Q6IBS0 349 aaKnown RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 BADQ92934 168 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 KREMEN1Q96MU8 473 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 RAB20Q9NX57 234 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 A0A1B0GUA9 196 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CTAGE15A4D2H0 777 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ABLIM1O14639 778 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CLDN3O15551 220 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TOM1L1O75674 476 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CTAGE8P0CG41 777 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 HARSP12081 509 aaKnown RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ZSCAN20P17040 1043 aaPredicted RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TCP1P17987 556 aaKnown RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 AXLP30530 894 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 RFC2P35250 354 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 GCNT1Q02742 428 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CKAP4Q07065 602 aaKnown RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ENOSF1Q7L5Y1 443 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CTAGE6Q86UF2 777 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 CTAGE4Q8IX94 777 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TAS1R2Q8TE23 839 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 SEPT8Q92599 483 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TLR10Q9BXR5 811 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 TOPORSQ9NS56 1045 aaPredicted RBP16.23■□□□□ 0.19
SCAF11-204ENST00000395454 NCANO14594 1321 aa16.23■□□□□ 0.19
SCAF11-204ENST00000395454 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
SCAF11-204ENST00000395454 CXCL10P02778 98 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 PROZP22891 400 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ENOX2Q16206 610 aaKnown RBP16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ZNF568Q3ZCX4 644 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ZBTB33Q86T24 672 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 MSANTD4Q8NCY6 345 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ZNF516Q92618 1163 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 NT5C1BQ96P26 610 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 POP1Q99575 1024 aaKnown RBP16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 PDZD7Q9H5P4 517 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 TNFSF13BQ9Y275 285 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 NR2E3Q9Y5X4 410 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 ANK1P16157 1881 aa16.22■□□□□ 0.19
SCAF11-204ENST00000395454 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 H2AFZP0C0S5 128 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 MFAP3P55082 362 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 TCEAL1Q15170 157 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 EEF1DP3Q658K8 133 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 MPZL3Q6UWV2 235 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 H2AFVQ71UI9 128 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 CREG2Q8IUH2 290 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 LRRC57Q8N9N7 239 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 APBB2Q92870 758 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 MSTO1Q9BUK6 570 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 TRIM6Q9C030 488 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 PDCL3Q9H2J4 239 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 NOCTQ9UK39 431 aaKnown RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 HYOU1Q9Y4L1 999 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 GRID2IPA4D2P6 1211 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 MGEA5O60502 916 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 TMEM253P0C7T8 217 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 ACRP10323 421 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 WNT7BP56706 349 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 MCL1Q07820 350 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 IFI16Q16666 785 aaKnown RBP16.21■□□□□ 0.19
SCAF11-204ENST00000395454 ARHGAP44Q17R89 818 aa16.21■□□□□ 0.19
SCAF11-204ENST00000395454 SLFN11Q7Z7L1 901 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms