RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RPL9P32969 192 aaKnown RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 ATXN1P54253 815 aaKnown RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 DMP1Q13316 513 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 GNL2Q13823 731 aaKnown RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 TPGS2Q68CL5 300 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 VITQ6UXI7 678 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 ZNF687Q8N1G0 1237 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 ZNF512Q96ME7 567 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 FAM126AQ9BYI3 521 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 CHRDQ9H2X0 955 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 ZNF334Q9HCZ1 680 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-203ENST00000394925 CNTN3Q9P232 1028 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 ARHGAP28Q9P2N2 729 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 USP18Q9UMW8 372 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 TICRRQ7Z2Z1 1910 aa23.11■■□□□ 1.29
TRAF4-203ENST00000394925 E9PMD0 336 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 MYL4P12829 197 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 GJA1P17302 382 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 PSMC3P17980 439 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 PROZP22891 400 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 MCM4P33991 863 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 VIPR2P41587 438 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 TWF1Q12792 350 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 ZNF280DQ6N043 979 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 MPZL3Q6UWV2 235 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 MAP4K3Q8IVH8 894 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 FAM3CQ92520 227 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 SMARCD2Q92925 531 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 ZBTB45Q96K62 511 aaPredicted RBP23.1■■□□□ 1.29
TRAF4-203ENST00000394925 SUSD3Q96L08 255 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 LMAN1LQ9HAT1 526 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 CEP72Q9P209 647 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 AFF4Q9UHB7 1163 aaKnown RBP23.1■■□□□ 1.29
TRAF4-203ENST00000394925 DNM3Q9UQ16 869 aa23.1■■□□□ 1.29
TRAF4-203ENST00000394925 PRR5-ARHGAP8B1AHC4 643 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 ABLIM1O14639 778 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 MEFVO15553 781 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-203ENST00000394925 MOSPD3O75425 235 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 ARHGAP8P85298 464 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 LMNB2Q03252 620 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 PDIA5Q14554 519 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 LPAL2Q16609 132 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 APPL2Q8NEU8 664 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 DDX12PQ92771 950 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 RUSC1Q9BVN2 902 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 GMEB2Q9UKD1 530 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 CDV3Q9UKY7 258 aaKnown RBP23.09■■□□□ 1.29
TRAF4-203ENST00000394925 NOL7Q9UMY1 257 aaKnown RBP23.09■■□□□ 1.29
TRAF4-203ENST00000394925 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
TRAF4-203ENST00000394925 PIAS3Q9Y6X2 628 aa23.09■■□□□ 1.29
TRAF4-203ENST00000394925 COL4A2P08572 1712 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 SLC16A4O15374 487 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 TDGF1P13385 188 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 CPB1P15086 417 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 TGM1P22735 817 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 TRAPPC10P48553 1259 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 NRLP54845 237 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 SEZ6Q53EL9 994 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 RNF19BQ6ZMZ0 732 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 FBXO18Q8NFZ0 1043 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 ZSCAN18Q8TBC5 510 aaPredicted RBP23.08■■□□□ 1.29
TRAF4-203ENST00000394925 DRC1Q96MC2 740 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 RAB34Q9BZG1 259 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 PARD6AQ9NPB6 346 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 ASAH2Q9NR71 780 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 RAB23Q9ULC3 237 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 STK24Q9Y6E0 443 aa23.08■■□□□ 1.29
TRAF4-203ENST00000394925 ACACBO00763 2458 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 PDCD11Q14690 1871 aaKnown RBP23.07■■□□□ 1.28
TRAF4-203ENST00000394925 SFI1A8K8P3 1242 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 PP2D1A8MPX8 630 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 MARCKSP29966 332 aaPredicted RBP23.07■■□□□ 1.28
TRAF4-203ENST00000394925 MAPK7Q13164 816 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 PTGDRQ13258 359 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 PPP2R5DQ14738 602 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 SLC10A6Q3KNW5 377 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 RINT1Q6NUQ1 792 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 IGSF22Q8N9C0 903 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 DEPDC1BQ8WUY9 529 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 CNTNAP3BQ96NU0 1288 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 CNTNAP3Q9BZ76 1288 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 TRPV5Q9NQA5 729 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 ANKFY1Q9P2R3 1169 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 PCDHB8Q9UN66 801 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
TRAF4-203ENST00000394925 ZNF263O14978 683 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 CCR3P51677 355 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 TEAD2Q15562 447 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 MAMSTRQ6ZN01 415 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 MFSD6LQ8IWD5 586 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 TMEM130Q8N3G9 435 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 LEMD2Q8NC56 503 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 IER2Q9BTL4 223 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 SLITRK6Q9H5Y7 841 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 TRPV4Q9HBA0 871 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 MAFFQ9ULX9 164 aa23.06■■□□□ 1.28
TRAF4-203ENST00000394925 NCANO14594 1321 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms