RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GBP2P32456 591 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-205ENST00000394892 RPL9P32969 192 aaKnown RBP9.65□□□□□ -0.86
ATG4A-205ENST00000394892 ID4P47928 161 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 CREMQ03060 361 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 TDGQ13569 410 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 HTR4Q13639 388 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 E2F4Q16254 413 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 SLC5A9Q2M3M2 681 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-205ENST00000394892 ADSSL1Q8N142 457 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 KCNG4Q8TDN1 519 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-205ENST00000394892 STAMQ92783 540 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 FGF14Q92915 247 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 CRISPLD1Q9H336 500 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 PLEKHA5Q9HAU0 1116 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 SLC38A7Q9NVC3 462 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 TBC1D7Q9P0N9 293 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 DPP7Q9UHL4 492 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 FBXL5Q9UKA1 691 aa9.65□□□□□ -0.86
ATG4A-205ENST00000394892 ZFHX2Q9C0A1 2572 aaPredicted RBP9.65□□□□□ -0.87
ATG4A-205ENST00000394892 DENND4AQ7Z401 1863 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 ARHGEF37A1IGU5 675 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 M0QZQ0 153 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 HNRNPDLO14979 420 aaKnown RBP9.64□□□□□ -0.87
ATG4A-205ENST00000394892 SYN3O14994 580 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 MOSPD3O75425 235 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 NFICP08651 508 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 POU2F2P09086 479 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 OR4Q2P0C623 313 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 HOXA9P31269 272 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 HOXD13P35453 343 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 CCR2P41597 374 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 ACOT2P49753 483 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 LIG4P49917 911 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 SPATA1Q5VX52 437 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 RRAGBQ5VZM2 374 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 JADE1Q6IE81 842 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 SHC4Q6S5L8 630 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 PARM1Q6UWI2 310 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 ANKS3Q6ZW76 656 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 GET4Q7L5D6 327 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-205ENST00000394892 APBB1IPQ7Z5R6 666 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-205ENST00000394892 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
ATG4A-205ENST00000394892 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 TCEAL4Q96EI5 215 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 KIF12Q96FN5 646 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 BICD1Q96G01 975 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 BORCS6Q96GS4 357 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 TMEM209Q96SK2 561 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 SEMA4AQ9H3S1 761 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 ZHX3Q9H4I2 956 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 DAXXQ9UER7 740 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-205ENST00000394892 PCDHB8Q9UN66 801 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 VWA8A3KMH1 1905 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 CACNA1HO95180 2353 aa9.64□□□□□ -0.87
ATG4A-205ENST00000394892 MYO15AQ9UKN7 3530 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 ANO9A1A5B4 782 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 SHISA7A6NL88 538 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PIRO00625 290 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 OAZ2O95190 189 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 KRT18P05783 430 aaKnown RBP9.63□□□□□ -0.87
ATG4A-205ENST00000394892 AOC1P19801 751 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CYP3A5P20815 502 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 FSHRP23945 695 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CDR1P51861 262 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 ARPP19P56211 112 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PRSS36Q5K4E3 855 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PPM1LQ5SGD2 360 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PDXDC1Q6P996 788 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 NPAS3Q8IXF0 933 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 TCEAL8Q8IYN2 117 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PDILTQ8N807 584 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 BEST2Q8NFU1 509 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 ZNF461Q8TAF7 563 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 FGF13Q92913 245 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 MSTO1Q9BUK6 570 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PLA2G2FQ9BZM2 168 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-205ENST00000394892 PIDD1Q9HB75 910 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CEP72Q9P209 647 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 IGSF9Q9P2J2 1179 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 CDH7Q9ULB5 785 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 UBQLN1Q9UMX0 589 aaKnown RBP9.63□□□□□ -0.87
ATG4A-205ENST00000394892 ZDHHC9Q9Y397 364 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 C2orf16Q68DN1 1984 aa9.63□□□□□ -0.87
ATG4A-205ENST00000394892 TDRD15B5MCY1 1934 aaKnown RBP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 NCANO14594 1321 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 H0YCG3 227 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms