RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CCDC33Q8N5R6 958 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 SNX24Q9Y343 169 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 PCDH11XQ9BZA7 1347 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 PCDH11YQ9BZA8 1340 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 TNFAIP8O95379 198 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 GNAT1P11488 350 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 ARHGEF6Q15052 776 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 TAS2R42Q7RTR8 314 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 SIX5Q8N196 739 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 FAR2Q96K12 515 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 ARF4P18085 180 aaPredicted RBP14.02□□□□□ -0.17
USP49-203ENST00000394253 CD58P19256 250 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 LRIG3Q6UXM1 1119 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 PJA1Q8NG27 643 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
USP49-203ENST00000394253 POLR1BQ9H9Y6 1135 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 EFHC2Q5JST6 749 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.17
USP49-203ENST00000394253 CACNA1CQ13936 2221 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 RAD51BO15315 384 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 MSR1P21757 451 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 PSMD4P55036 377 aaKnown RBP14.02□□□□□ -0.17
USP49-203ENST00000394253 C1orf232A0A0U1RR37 186 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 RPS7P62081 194 aaKnown RBP14.02□□□□□ -0.17
USP49-203ENST00000394253 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.17
USP49-203ENST00000394253 PSMD12O00232 456 aaPredicted RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 AHCYL1O43865 530 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 MAGEA2P43356 314 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 CHRNB3Q05901 458 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 SCRN3Q0VDG4 424 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 ANO4Q32M45 955 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 TCEAL5Q5H9L2 206 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PPP2R3CQ969Q6 453 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 TRPM2O94759 1503 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 ZNF23P17027 643 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 HSD17B4P51659 736 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 CCDC185Q8N715 623 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 TMEM35BQ8NCS4 154 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 CCDC28BQ9BUN5 200 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PCDHA4Q9UN74 947 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PGBD4Q96DM1 585 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 NPR3P17342 541 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 ZNF284Q2VY69 593 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 CACHD1Q5VU97 1274 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 MAN1B1Q9UKM7 699 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 UBE2QL1A1L167 161 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 AXIN1O15169 862 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PDE8AO60658 829 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 LRPAP1P30533 357 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 ARSEP51690 589 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 YWHAZP63104 245 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 OTUD4Q01804 1114 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 TCP10Q12799 353 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 TTC39BQ5VTQ0 682 aaPredicted RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 PCNX4Q63HM2 1172 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 MACC1Q6ZN28 852 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 AMNQ9BXJ7 453 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PARD3Q8TEW0 1356 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 FRMPD2Q68DX3 1309 aaPredicted RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 SSNA1O43805 119 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 SEC24BO95487 1268 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 KCNT1Q5JUK3 1230 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 LAYNQ6UX15 382 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 RHOT1Q8IXI2 618 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 RPRD2Q5VT52 1461 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 FLT4P35916 1363 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 MDH1BQ5I0G3 518 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 TSHZ1Q6ZSZ6 1077 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 KRT35Q92764 455 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 BPIFA3Q9BQP9 254 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 THRAP3Q9Y2W1 955 aaKnown RBP14.01□□□□□ -0.17
USP49-203ENST00000394253 ZHX2Q9Y6X8 837 aa14.01□□□□□ -0.17
USP49-203ENST00000394253 SH3TC1Q8TE82 1336 aa14□□□□□ -0.17
USP49-203ENST00000394253 SOAT1P35610 550 aa14□□□□□ -0.17
USP49-203ENST00000394253 ACLYP53396 1101 aa14□□□□□ -0.17
USP49-203ENST00000394253 NCAPHQ15003 741 aa14□□□□□ -0.17
USP49-203ENST00000394253 CYP51A1Q16850 503 aa14□□□□□ -0.17
USP49-203ENST00000394253 ALFQ53S48 1182 aa14□□□□□ -0.17
USP49-203ENST00000394253 AGBL2Q5U5Z8 902 aa14□□□□□ -0.17
USP49-203ENST00000394253 PYHIN1Q6K0P9 492 aa14□□□□□ -0.17
USP49-203ENST00000394253 RASSF6Q6ZTQ3 369 aa14□□□□□ -0.17
USP49-203ENST00000394253 METTL22Q9BUU2 404 aaPredicted RBP14□□□□□ -0.17
USP49-203ENST00000394253 ADI1Q9BV57 179 aa14□□□□□ -0.17
USP49-203ENST00000394253 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
USP49-203ENST00000394253 CSNK2BP67870 215 aa14□□□□□ -0.17
USP49-203ENST00000394253 BEST2Q8NFU1 509 aa14□□□□□ -0.17
USP49-203ENST00000394253 ARMC7Q9H6L4 198 aa14□□□□□ -0.17
USP49-203ENST00000394253 NOD2Q9HC29 1040 aa14□□□□□ -0.17
USP49-203ENST00000394253 PRKAG2Q9UGJ0 569 aa14□□□□□ -0.17
USP49-203ENST00000394253 IQGAP2Q13576 1575 aa14□□□□□ -0.17
USP49-203ENST00000394253 RGS21Q2M5E4 152 aa14□□□□□ -0.17
USP49-203ENST00000394253 ZNF564Q8TBZ8 553 aaPredicted RBP14□□□□□ -0.17
USP49-203ENST00000394253 PTPRN2Q92932 1015 aa14□□□□□ -0.17
USP49-203ENST00000394253 BDH2Q9BUT1 245 aa14□□□□□ -0.17
USP49-203ENST00000394253 ADAMTS1Q9UHI8 967 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms