RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 NRP1O14786 923 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 B4GALT3O60512 393 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 STAU1O95793 577 aaKnown RBP20.84■□□□□ 0.93
PSEN1-203ENST00000394157 OR1G1P47890 313 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 CLCNKBP51801 687 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 COPB1P53618 953 aaKnown RBP20.84■□□□□ 0.93
PSEN1-203ENST00000394157 MYL7Q01449 175 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 NCOA4Q13772 614 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 APTXQ7Z2E3 356 aaKnown RBP20.84■□□□□ 0.93
PSEN1-203ENST00000394157 COLGALT1Q8NBJ5 622 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 PLVAPQ9BX97 442 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 RBSNQ9H1K0 784 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 GOLGA2P5Q9HBQ8 144 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 TAB2Q9NYJ8 693 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 SIX4Q9UIU6 781 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
PSEN1-203ENST00000394157 COLQQ9Y215 455 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-203ENST00000394157 LCHNA4D1U4 455 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 SERPINC1P01008 464 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 CA3P07451 260 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 KRT19P08727 400 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 LINC00271P0C7V0 271 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 POLR2BP30876 1174 aaKnown RBP20.83■□□□□ 0.93
PSEN1-203ENST00000394157 SLC11A1P49279 550 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 GUCY2FP51841 1108 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 SGSM1Q2NKQ1 1148 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 UVSSAQ2YD98 709 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 CBWD6Q4V339 395 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 CBWD3Q5JTY5 395 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 CBWD5Q5RIA9 395 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 CCDC150Q8NCX0 1101 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 VPS16Q9H269 839 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 VRTNQ9H8Y1 702 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 RAB20Q9NX57 234 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 SPG21Q9NZD8 308 aa20.83■□□□□ 0.93
PSEN1-203ENST00000394157 RANBP2P49792 3224 aaKnown RBP20.82■□□□□ 0.92
PSEN1-203ENST00000394157 ARHGEF37A1IGU5 675 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 LGALS16A8MUM7 142 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 TRAPPC3O43617 180 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 B3GAT3O94766 335 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 HLA-DRAP01903 254 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 RB1P06400 928 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 BMPR1AP36894 532 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 PIK3CAP42336 1068 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 TAF6P49848 677 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 ELAVL2Q12926 359 aaKnown RBP20.82■□□□□ 0.92
PSEN1-203ENST00000394157 SV2CQ496J9 727 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 FKBP15Q5T1M5 1219 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 TAS1R2Q8TE23 839 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 HPDLQ96IR7 371 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 FAXDC2Q96IV6 333 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 TGS1Q96RS0 853 aaKnown RBP20.82■□□□□ 0.92
PSEN1-203ENST00000394157 HCSTQ9UBK5 93 aa20.82■□□□□ 0.92
PSEN1-203ENST00000394157 YBX2Q9Y2T7 364 aaKnown RBP20.82■□□□□ 0.92
PSEN1-203ENST00000394157 A0A1B0GTH6 734 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 C5orf67F2Z3F1 127 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 PES1O00541 588 aaKnown RBP20.81■□□□□ 0.92
PSEN1-203ENST00000394157 VNN1O95497 513 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 CST3P01034 146 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-203ENST00000394157 TPM3P06753 285 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 MYOGP15173 224 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 AARSP49588 968 aaKnown RBP eCLIP20.81■□□□□ 0.92
PSEN1-203ENST00000394157 LILRA4P59901 499 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 ERVK-21P61565 698 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 FANCCQ00597 558 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 EPC2Q52LR7 807 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 GBP6Q6ZN66 633 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 SLC39A11Q8N1S5 342 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 IGSF21Q96ID5 467 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 FAM84AQ96KN4 292 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 PAAF1Q9BRP4 392 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 SLC28A3Q9HAS3 691 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 ADAM28Q9UKQ2 775 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 PRG3Q9Y2Y8 225 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-203ENST00000394157 NUB1Q9Y5A7 615 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 GBF1Q92538 1859 aa20.81■□□□□ 0.92
PSEN1-203ENST00000394157 TADA2AO75478 443 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 KIF4AO95239 1232 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 ASS1P00966 412 aaKnown RBP20.8■□□□□ 0.92
PSEN1-203ENST00000394157 DNAJB2P25686 324 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 PBX2P40425 430 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 MYL6P60660 151 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 TAP1Q03518 808 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 WDR44Q5JSH3 913 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 EHBP1Q8NDI1 1231 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 TMEM169Q96HH4 297 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 XYLT2Q9H1B5 865 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 RTN4Q9NQC3 1192 aaKnown RBP20.8■□□□□ 0.92
PSEN1-203ENST00000394157 MARCH5Q9NX47 278 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 GDAP2Q9NXN4 497 aa20.8■□□□□ 0.92
PSEN1-203ENST00000394157 SF3B1O75533 1304 aaKnown RBP eCLIP20.79■□□□□ 0.926e-7■■■■■ 93.2
PSEN1-203ENST00000394157 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
PSEN1-203ENST00000394157 CBFA2T2O43439 604 aa20.79■□□□□ 0.92
PSEN1-203ENST00000394157 P4HA1P13674 534 aa20.79■□□□□ 0.92
PSEN1-203ENST00000394157 CTNNB1P35222 781 aa20.79■□□□□ 0.92
PSEN1-203ENST00000394157 KRT17Q04695 432 aa20.79■□□□□ 0.92
PSEN1-203ENST00000394157 EXOC3L4Q17RC7 722 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms