RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 PPP2R2CQ9Y2T4 447 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 CXCL10P02778 98 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 GHRP10912 638 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 SOX5P35711 763 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 NEK11Q8NG66 645 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 ASB7Q9H672 318 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
PDGFD-202ENST00000393158 SMIM28A0A1B0GU29 152 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 C9IYK1 514 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 ZNF623O75123 536 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 ZC3H11AO75152 810 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDGFD-202ENST00000393158 STAU1O95793 577 aaKnown RBP11.64□□□□□ -0.55
PDGFD-202ENST00000393158 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PLEKHG4Q58EX7 1191 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 CATSPER4Q7RTX7 472 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 TWNKQ96RR1 684 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PACSIN1Q9BY11 444 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 GOLGA2P5Q9HBQ8 144 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PLXNA3P51805 1871 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 EFEMP2O95967 443 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 TPM2P07951 284 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 LPPQ93052 612 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 UBE2TQ9NPD8 197 aaPredicted RBP11.63□□□□□ -0.55
PDGFD-202ENST00000393158 RGS18Q9NS28 235 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 OBSL1O75147 1896 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.63□□□□□ -0.55
PDGFD-202ENST00000393158 SSU72P8A0A1W2PR75 194 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 EIF4A3P38919 411 aaKnown RBP11.63□□□□□ -0.55
PDGFD-202ENST00000393158 NCOA4Q13772 614 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 A0A0U1RQF3 1178 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
PDGFD-202ENST00000393158 F8W810 466 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 ERLIN2O94905 339 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 IL18RAPO95256 599 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 KRT13P13646 458 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 FMO1Q01740 532 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 CYP27A1Q02318 531 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 FAM47CQ5HY64 1035 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 CLLU1OSQ5K130 101 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 KBTBD7Q8WVZ9 684 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
PDGFD-202ENST00000393158 CHST12Q9NRB3 414 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 USP34Q70CQ2 3546 aa11.63□□□□□ -0.55
PDGFD-202ENST00000393158 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 NOP14P78316 857 aaKnown RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 DERAQ9Y315 318 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 HCRTO43612 131 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 N4BP1O75113 896 aaKnown RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 CYP3A5P20815 502 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 GLRA4Q5JXX5 417 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 TMTC1Q8IUR5 882 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 TOX2Q96NM4 488 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 KLK14Q9P0G3 267 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 SERPING1P05155 500 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 RFX1P22670 979 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 MSNP26038 577 aaKnown RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 KIF11P52732 1056 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 ACAP3Q96P50 834 aa11.62□□□□□ -0.55
PDGFD-202ENST00000393158 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 RC3H2Q9HBD1 1191 aaKnown RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
PDGFD-202ENST00000393158 ARL5CA6NH57 179 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 GFPT2O94808 682 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 ITGB3P05106 788 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 TNNI1P19237 187 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDGFD-202ENST00000393158 PTP4A2Q12974 167 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 CUL2Q13617 745 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 WDTC1Q8N5D0 677 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 TSC1Q92574 1164 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 PJA2O43164 708 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 RPS6KA5O75582 802 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
PDGFD-202ENST00000393158 FAM193AP78312 1265 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 INCA1Q0VD86 236 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 SLC18A3Q16572 532 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 DUOXA2Q1HG44 320 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 TFAP2BQ92481 460 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 SMYD3Q9H7B4 428 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
PDGFD-202ENST00000393158 DAAM1Q9Y4D1 1078 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 ATP8B3O60423 1300 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms