RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 ALG6Q9Y672 507 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 PPP1R12AO14974 1030 aaPredicted RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 TADA2AO75478 443 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 SNCBQ16143 134 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 ELMSAN1Q6PJG2 1045 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 EXT2Q93063 718 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 THOC1Q96FV9 657 aaKnown RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 TOPAZ1Q8N9V7 1692 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 OGTO15294 1046 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 JADE1Q6IE81 842 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 ANKMY2Q8IV38 441 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 ATP11CQ8NB49 1132 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 RAD51CO43502 376 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 TRAPPC3O43617 180 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 CLNS1AP54105 237 aaKnown RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 PITPNM3Q9BZ71 974 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 OLFML3Q9NRN5 406 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 SYNPO2Q9UMS6 1093 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 SLC12A3P55017 1021 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 MDM2Q00987 491 aaPredicted RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 E2F4Q16254 413 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 SYCP2LQ5T4T6 812 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 METTL7BQ6UX53 244 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 NIPA1Q7RTP0 329 aa17.49■□□□□ 0.39
SCN3B-202ENST00000392770 C1orf131Q8NDD1 294 aaKnown RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 CHD2O14647 1828 aaKnown RBP17.49■□□□□ 0.39
SCN3B-202ENST00000392770 PDHXO00330 501 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 CYP24A1Q07973 514 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 COL9A3Q14050 684 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 FEZF2Q8TBJ5 459 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 CGRRF1Q99675 332 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 FAM118BQ9BPY3 351 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 NUF2Q9BZD4 464 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 MLXIPLQ9NP71 852 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 TERF2Q15554 542 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 TRAIPQ9BWF2 469 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 KLK14Q9P0G3 267 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 A0A087X0T9 212 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 FAM228BP0C875 321 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 ALDH5A1P51649 535 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 FIGNQ5HY92 759 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 PDCD6IPQ8WUM4 868 aaKnown RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 TXLNGQ9NUQ3 528 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 SERPINB6P35237 376 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 GNL1P36915 607 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 TMPRSS15P98073 1019 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 SMAD1Q15797 465 aaKnown RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 BEND6Q5SZJ8 279 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 BTBD6Q96KE9 485 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 PRDM5Q9NQX1 630 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 BLOC1S4Q9NUP1 217 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 BCL9LQ86UU0 1499 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 GPD1P21695 349 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 HIF1AQ16665 826 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 WDR70Q9NW82 654 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
SCN3B-202ENST00000392770 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-202ENST00000392770 CYP3A4P08684 503 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 NCF2P19878 526 aaPredicted RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 EPAS1Q99814 870 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 EML1O00423 815 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 ORC1Q13415 861 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 HSPA4LO95757 839 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 MAPTP10636 758 aaKnown RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 CCNI2Q6ZMN8 369 aaPredicted RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 VPS11Q9H270 941 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 GLRA4Q5JXX5 417 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 CRLF3Q8IUI8 442 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 DUSP10Q9Y6W6 482 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 A0A1B0GUA9 196 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 CDR2Q01850 454 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 LAMTOR4Q0VGL1 99 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 SMTNL2Q2TAL5 461 aa17.47■□□□□ 0.39
SCN3B-202ENST00000392770 GPBP1L1Q9HC44 474 aaPredicted RBP17.47■□□□□ 0.39
SCN3B-202ENST00000392770 CCDC195A0A1B0GUA6 201 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 PTPRAP18433 802 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 TAC1P20366 129 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 PID1Q7Z2X4 250 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 TMC2Q8TDI7 906 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 MAPK13O15264 365 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 SLURP2P0DP57 97 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 ACADSBP45954 432 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 PAPOLAP51003 745 aaKnown RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 FAM47EQ6ZV65 393 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 VPS39Q96JC1 886 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 ZCCHC17Q9NP64 241 aaKnown RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 G3BP2Q9UN86 482 aaKnown RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 ABCC6O95255 1503 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms