RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 PUS7LQ9H0K6 701 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 FAM49AQ9H0Q0 323 aaPredicted RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TAF1DQ9H5J8 278 aaPredicted RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 HERC5Q9UII4 1024 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TCHHQ07283 1943 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 KCNA3P22001 575 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 YAF2Q8IY57 180 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 RGS18Q9NS28 235 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 DNALI1O14645 258 aaPredicted RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TM9SF1O15321 606 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 NGRNQ9NPE2 291 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 KLHL20Q9Y2M5 609 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ZNF467Q7Z7K2 595 aaPredicted RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 HAVCR1Q96D42 359 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TGM3Q08188 693 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 PPIDQ08752 370 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 PDAP1Q13442 181 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 EZH2Q15910 746 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 OR6P1Q8NGX9 317 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ZBED2Q9BTP6 218 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 SLITRK2Q9H156 845 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 CEP72Q9P209 647 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TRPC5OSA6NMA1 111 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FAM25AB3EWG3 89 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FAM25CB3EWG5 89 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FAM25GB3EWG6 89 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 MFN2O95140 757 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CYP21A2P08686 494 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 E2F4Q16254 413 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CENPTQ96BT3 561 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 TMCC3Q9ULS5 477 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SPATA2Q9UM82 520 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SFI1A8K8P3 1242 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FKBP9O95302 570 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 PEX3P56589 373 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CLEC16AQ2KHT3 1053 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FKBP9P1Q75LS8 142 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 FAM160B2Q86V87 743 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 RNASE11Q8TAA1 199 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SARS2Q9NP81 518 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 AVENQ9NQS1 362 aaPredicted RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 DPYDQ12882 1025 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SAMSN1Q9NSI8 373 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 DOLKQ9UPQ8 538 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SYNDIG1LA6NDD5 238 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 ZCCHC8Q6NZY4 707 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 OMA1Q96E52 524 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 EXOSC4Q9NPD3 245 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 KDM5CP41229 1560 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 TRAPPC3O43617 180 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 RXRBP28702 533 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SH3BP4Q9P0V3 963 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 RPAP1Q9BWH6 1393 aaPredicted RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 APOL1O14791 398 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 CDK8P49336 464 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 ST8SIA6P61647 398 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 TRIM51Q9BSJ1 452 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 RANBP17Q9H2T7 1088 aaKnown RBP15.42■□□□□ 0.06
CCDC50-201ENST00000392455 PLEKHA5Q9HAU0 1116 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 SGSM3Q96HU1 749 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 HIC2Q96JB3 615 aa15.42■□□□□ 0.06
CCDC50-201ENST00000392455 MYO1GB0I1T2 1018 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 USP1O94782 785 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 C3orf20Q8ND61 904 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 PAGE5Q96GU1 130 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 ADI1Q9BV57 179 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 SERPINB3P29508 390 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 SKP1P63208 163 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 C6orf10Q5SRN2 563 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 TTC33Q6PID6 262 aaPredicted RBP15.41■□□□□ 0.06
CCDC50-201ENST00000392455 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 KITP10721 976 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 RCN1Q15293 331 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 C17orf80Q9BSJ5 609 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 MEFVO15553 781 aaPredicted RBP15.41■□□□□ 0.06
CCDC50-201ENST00000392455 SLC27A3Q5K4L6 730 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 RHOT1Q8IXI2 618 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 PARVAQ9NVD7 372 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 KLHL3Q9UH77 587 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 DNAJC12Q9UKB3 198 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 CROCCQ5TZA2 2017 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 PRPF3O43395 683 aaKnown RBP15.41■□□□□ 0.06
CCDC50-201ENST00000392455 ASNA1O43681 348 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 MAGOHP61326 146 aaKnown RBP15.41■□□□□ 0.06
CCDC50-201ENST00000392455 GPR101Q96P66 508 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms