RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 LMBRD2Q68DH5 695 aaPredicted RBP17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 EP400NLQ6ZTU2 488 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 ADGRD2Q7Z7M1 963 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 CEP57Q86XR8 500 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 NT5DC4Q86YG4 428 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 SLC9A9Q8IVB4 645 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 TRIML1Q8N9V2 468 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 C3orf58Q8NDZ4 430 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 FAM84AQ96KN4 292 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 HERC2P3Q9BVR0 1158 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 TLE6Q9H808 572 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 DMAC2Q9NW81 257 aa17.47■□□□□ 0.39
IGHV3-23-201ENST00000390609 HIDE1A8MVS5 230 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 TMEM189-UBE2V1I3L0A0 370 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 PER2O15055 1255 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 BMP6P22004 513 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 KCNA5P22460 613 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 LRPAP1P30533 357 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 NRIP1P48552 1158 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 CASP4P49662 377 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 MYBPC2Q14324 1141 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 USP41Q3LFD5 358 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 LEXMQ3ZCV2 418 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 COBLL1Q53SF7 1204 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 MRPL43Q8N983 215 aaKnown RBP17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 DHTKD1Q96HY7 919 aaPredicted RBP17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 R3HCC1Q9Y3T6 440 aaKnown RBP17.46■□□□□ 0.39
IGHV3-23-201ENST00000390609 MUC6Q6W4X9 2439 aa17.46■□□□□ 0.38
IGHV3-23-201ENST00000390609 TRIM49BA6NDI0 452 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 PPP1R3GB7ZBB8 358 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 CETN3O15182 167 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 TNNC2P02585 160 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 KRT19P08727 400 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 ALADP13716 330 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 CCNE1P24864 410 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 PSMD6Q15008 389 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 EDRF1Q3B7T1 1238 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 ZCWPW2Q504Y3 356 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 ANKRD40Q6AI12 368 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 CENPPQ6IPU0 288 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 NELFBQ8WX92 580 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 RIN2Q8WYP3 895 aaPredicted RBP17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 EEF2KMTQ96G04 330 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 ANKRD36BP1Q96IX9 119 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 SSX2IPQ9Y2D8 614 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 TRIP11Q15643 1979 aa17.45■□□□□ 0.38
IGHV3-23-201ENST00000390609 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PPEF2O14830 753 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 ITGB3P05106 788 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 IL9P15248 144 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PSMC2P35998 433 aaKnown RBP17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 LRRC63Q05C16 580 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 HYAL1Q12794 435 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 NFIL3Q16649 462 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 DUOXA2Q1HG44 320 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 CD300LGQ6UXG3 332 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 DSTYKQ6XUX3 929 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 WDR49Q8IV35 697 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 FAM186BQ8IYM0 893 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 RNF168Q8IYW5 571 aaPredicted RBP17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 CSGALNACT2Q8N6G5 542 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 OR5B17Q8NGF7 314 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 MFSD14AQ96MC6 490 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 CGRRF1Q99675 332 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 TTPALQ9BTX7 342 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 EMILIN2Q9BXX0 1053 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PTPRJQ12913 1337 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 PIEZO1Q92508 2521 aa17.44■□□□□ 0.38
IGHV3-23-201ENST00000390609 BRWD1Q9NSI6 2320 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 BICDL2A1A5D9 508 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 AKAP3O75969 853 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 EFEMP2O95967 443 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 KRT13P13646 458 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 POLR2BP30876 1174 aaKnown RBP17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 GTF2F1P35269 517 aaKnown RBP eCLIP17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 STX17P56962 302 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 DSG1Q02413 1049 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 PAK1Q13153 545 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 RTP2Q5QGT7 225 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 PRSS55Q6UWB4 352 aaPredicted RBP17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 TMEM174Q8WUU8 243 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 CHST7Q9NS84 486 aa17.43■□□□□ 0.38
IGHV3-23-201ENST00000390609 ANO9A1A5B4 782 aa17.42■□□□□ 0.38
IGHV3-23-201ENST00000390609 PIRO00625 290 aa17.42■□□□□ 0.38
IGHV3-23-201ENST00000390609 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
IGHV3-23-201ENST00000390609 KLRC2P26717 231 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms