RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 HOXA11P31270 313 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ECI1P42126 302 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 GEN1Q17RS7 908 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 PRAMEF19Q5SWL8 479 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 MEX3CQ5U5Q3 659 aaKnown RBP-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ANKS6Q68DC2 871 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ZNF343Q6P1L6 599 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 FOXR2Q6PJQ5 311 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 UNC5AQ6ZN44 842 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ADGRA1Q86SQ6 560 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 RSPH3Q86UC2 560 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ANKRD13BQ86YJ7 626 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 NLGN4XQ8N0W4 816 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 Q8N7P7 452 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 AMER3Q8N944 861 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 PJA1Q8NG27 643 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 SIGLEC11Q96RL6 698 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 RTBDNQ9BSG5 229 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 REXO4Q9GZR2 422 aaKnown RBP-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 TMEM8AQ9HCN3 771 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 TMEM184CQ9NVA4 438 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 INTS7Q9NVH2 962 aaKnown RBP-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 ING3Q9NXR8 418 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 DNAI1Q9UI46 699 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 NOTCH1P46531 2555 aa-0.19□□□□□ -2.44
TRAJ42-201ENST00000390495 MEIOCA2RUB1 952 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 B5MCH6 92 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 FOXN3O00409 490 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 NFATC1O95644 943 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 ZNF16P17020 682 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 GARTP22102 1010 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 GBP2P32456 591 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 HSD11B2P80365 405 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 ID2Q02363 134 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 MORC1Q86VD1 984 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 ANKRD52Q8NB46 1076 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 ZFP28Q8NHY6 868 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 SH3RF2Q8TEC5 729 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 TBC1D5Q92609 795 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 SLC25A28Q96A46 364 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 FBXO17Q96EF6 278 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 EXOC2Q96KP1 924 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 TMEM74Q96NL1 305 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 POLR3BQ9NW08 1133 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 NOC2LQ9Y3T9 749 aaKnown RBP-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 SSPOA2VEC9 5147 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 FSIP2Q5CZC0 6907 aa-0.2□□□□□ -2.44
TRAJ42-201ENST00000390495 NOP56O00567 594 aaKnown RBP-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 ZNF213O14771 459 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 SYF2O95926 243 aaKnown RBP-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 C4BPAP04003 597 aaKnown RBP-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 GRK2P25098 689 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 GRK3P35626 688 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 SRPK2P78362 688 aaKnown RBP-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 PHC1P78364 1004 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 ACSM2AQ08AH3 577 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 PRTGQ2VWP7 1150 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 GNPTABQ3T906 1256 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 TCTE1Q5JU00 501 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 DEF8Q6ZN54 512 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 B4GALNT4Q76KP1 1039 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 KLHDC8BQ8IXV7 354 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 FAM222BQ8WU58 562 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 DYDC2Q96IM9 177 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 FRMD6Q96NE9 622 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 ZNF599Q96NL3 588 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 PGLYRP2Q96PD5 576 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 UIMC1Q96RL1 719 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 EPYCQ99645 322 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 TUBB6Q9BUF5 446 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 CDT1Q9H211 546 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 THSD1Q9NS62 852 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 PRSS21Q9Y6M0 314 aa-0.21□□□□□ -2.44
TRAJ42-201ENST00000390495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 CCDC78A2IDD5 438 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 WDR27A2RRH5 827 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 SPTLC2O15270 562 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 BUB3O43684 328 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 CNOT3O75175 753 aaKnown RBP-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 FOXH1O75593 365 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 MMEP08473 750 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 FGF2P09038 288 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 CLEC2LP0C7M8 214 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 ARSAP15289 507 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 ANOS1P23352 680 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 MCM4P33991 863 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 NDUFV1P49821 464 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 ZNF165P49910 485 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 EEF1A2Q05639 463 aaKnown RBP-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 WASHC2DQ5SRD0 308 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 MEI1Q5TIA1 1274 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 SFTPA1Q8IWL2 248 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 TRIM59Q8IWR1 403 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 HIPK4Q8NE63 616 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 BVESQ8NE79 360 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 LPIN2Q92539 896 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 RITA1Q96K30 269 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 SRPK3Q9UPE1 567 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 ATP23Q9Y6H3 246 aa-0.22□□□□□ -2.44
TRAJ42-201ENST00000390495 ZHX2Q9Y6X8 837 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms