RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 BRAFP15056 766 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 CASP5P51878 434 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 TPI1P60174 286 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 BEX3Q00994 111 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 ADCY2Q08462 1091 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 IFT172Q9UG01 1749 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 RAB44Q7Z6P3 723 aaPredicted RBP15.38■□□□□ 0.05
PSME4-201ENST00000389993 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 RAB6BQ9NRW1 208 aa15.38■□□□□ 0.05
PSME4-201ENST00000389993 GJB1P08034 283 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 VGLL4Q14135 290 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 RMDN1Q96DB5 314 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 SPATC1LQ9H0A9 340 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 SLITRK3O94933 977 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 RALAP11233 206 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 LRRC31Q6UY01 552 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 TAS2R42Q7RTR8 314 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 EMC1Q8N766 993 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 PPARGC1AQ9UBK2 798 aaKnown RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 ENDOD1O94919 500 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 TGFB2P61812 414 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 KIF19Q2TAC6 998 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 FAM71DQ8N9W8 422 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 PABPC5Q96DU9 382 aaKnown RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 PDCD2LQ9BRP1 358 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 ANGPTL8Q6UXH0 198 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 CHMP2BQ9UQN3 213 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 ITIH6Q6UXX5 1313 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 SLC25A27O95847 323 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 KRT7P08729 469 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 GNL1P36915 607 aaPredicted RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 COBLL1Q53SF7 1204 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 PPWD1Q96BP3 646 aaKnown RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 LACRTQ9GZZ8 138 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 MARCOQ9UEW3 520 aaPredicted RBP15.37■□□□□ 0.05
PSME4-201ENST00000389993 STAP1Q9ULZ2 295 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 PPME1Q9Y570 386 aa15.37■□□□□ 0.05
PSME4-201ENST00000389993 KBTBD13C9JR72 458 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 HBP1O60381 514 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 ASTN2O75129 1339 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 NEMP1O14524 444 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 NVLO15381 856 aaKnown RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 NCAM1P13591 858 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 TSNAXIP1Q2TAA8 658 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 KCNV2Q8TDN2 545 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 SPDL1Q96EA4 605 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 PIH1D1Q9NWS0 290 aaKnown RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 CHRNA3P32297 505 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 MYL6P60660 151 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 TFDP2Q14188 446 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 RNF219Q5W0B1 726 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 SNTG2Q9NY99 539 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 XPO7Q9UIA9 1087 aaKnown RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 DLG5Q8TDM6 1919 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 EIF3DO15371 548 aaKnown RBP eCLIP15.36■□□□□ 0.059e-18■□□□□ 10.5
PSME4-201ENST00000389993 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 POMCP01189 267 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 ADCYAP1R1P41586 468 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 CDH8P55286 799 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 DMTNQ08495 405 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 HIBCHQ6NVY1 386 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 PNKPQ96T60 521 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.36■□□□□ 0.058e-47■■■□□ 14.6
PSME4-201ENST00000389993 C17orf102A2RUQ5 167 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 PFDN6O15212 129 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 NOL3O60936 208 aaKnown RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 ATXN3P54252 364 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 DLG4P78352 724 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 SATB1Q01826 763 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 IER5Q5VY09 327 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 SZRD1Q7Z422 152 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 ATP11CQ8NB49 1132 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 CYFIP2Q96F07 1278 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 EDEM3Q9BZQ6 932 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 PDGFDQ9GZP0 370 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 GBA2Q9HCG7 927 aaPredicted RBP15.36■□□□□ 0.05
PSME4-201ENST00000389993 HPCAL4Q9UM19 191 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 KCNH4Q9UQ05 1017 aa15.36■□□□□ 0.05
PSME4-201ENST00000389993 HMGB1P1B2RPK0 211 aaPredicted RBP15.35■□□□□ 0.05
PSME4-201ENST00000389993 PCNX4Q63HM2 1172 aa15.35■□□□□ 0.05
PSME4-201ENST00000389993 ZNF560Q96MR9 790 aa15.35■□□□□ 0.05
PSME4-201ENST00000389993 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
PSME4-201ENST00000389993 VCX3BQ9H321 246 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms