RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TPBGLP0DKB5 382 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 ANXA13P27216 316 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 POLE2P56282 527 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 ANO5Q75V66 913 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 SRRM1Q8IYB3 904 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TEX9Q8N6V9 391 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 FAM13CQ8NE31 585 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 PWWP2AQ96N64 755 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TMEM117Q9H0C3 514 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TCEAL9Q9UHQ7 104 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 LRRC42Q9Y546 428 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 O00370 1275 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TMEM253P0C7T8 217 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 CCNB1P14635 433 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 EPHB2P29323 1055 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 UCMAQ8WVF2 138 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 SPOCK2Q92563 424 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 PITPNM3Q9BZ71 974 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 USP20Q9Y2K6 914 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 ZBTB7AO95365 584 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 SGPL1O95470 568 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 FTLP02792 175 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 PTDSS1P48651 473 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 DRG2P55039 364 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 GTF2BQ00403 316 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TRIP13Q15645 432 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 NIPA1Q7RTP0 329 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 STK32AQ8WU08 396 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 BSNDQ8WZ55 320 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 SEMA4DQ92854 862 aa18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 TOPORSQ9NS56 1045 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-202ENST00000389805 VWA5AO00534 786 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 ATMINO43313 823 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CALCAP01258 141 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CHKAP35790 457 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PEX5P50542 639 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 KIF22Q14807 665 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 KYNUQ16719 465 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 RPUSD2Q8IZ73 545 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PPP1R12CQ9BZL4 782 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PIM2Q9P1W9 311 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CTTNBP2NLQ9P2B4 639 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CHRNA3P32297 505 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 FOXN2P32314 431 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PSMC5P62195 406 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 MESDQ14696 234 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PPP2R5EQ16537 467 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PCDHB18PQ96TA0 734 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 PCDHA3Q9Y5H8 950 aa18.8■□□□□ 0.6
SQSTM1-202ENST00000389805 CBX6O95503 412 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 ATP6V1C1P21283 382 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 NPTX2P47972 431 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 MFSD5Q6N075 450 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 CROCCP2Q86T23 111 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 MICALL2Q8IY33 904 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 C4orf19Q8IY42 314 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 TMEM109Q9BVC6 243 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 TAOK3Q9H2K8 898 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 CYP26A1O43174 497 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 ZNF862O60290 1169 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 VPS41P49754 854 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 SLC47A2Q86VL8 602 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 PCNTO95613 3336 aa18.79■□□□□ 0.6
SQSTM1-202ENST00000389805 PODXLO00592 558 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 ZBED4O75132 1171 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 CNGA1P29973 690 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 MXI1P50539 228 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 CALCOCO2Q13137 446 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 MUM1Q2TAK8 710 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 PRUNE1Q86TP1 453 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 PHC3Q8NDX5 983 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 TXLNGQ9NUQ3 528 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 NCANO14594 1321 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 ANKRD62A6NC57 917 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 WDR64B1ANS9 1081 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 LYPLA2O95372 231 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 PYGMP11217 842 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 MRPS35P82673 323 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 ROR2Q01974 943 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 KLC1Q07866 573 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 TMEM161BQ8NDZ6 487 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 DNAJC9Q8WXX5 260 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 BTBD6Q96KE9 485 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 TBC1D10AQ9BXI6 508 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 MOV10L1Q9BXT6 1211 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 SLCO1B3Q9NPD5 702 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 GABBR1Q9UBS5 961 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 PARP2Q9UGN5 583 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 TBX20Q9UMR3 447 aa18.78■□□□□ 0.6
SQSTM1-202ENST00000389805 DENND3A2RUS2 1198 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms