RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 NCALDP61601 193 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRIP10Q15642 601 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 C1orf228Q6PIY5 440 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 RCOR2Q8IZ40 523 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 PWWP2AQ96N64 755 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 NINJ2Q9NZG7 142 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-201ENST00000389328 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ATP9AO75110 1047 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ATRNO75882 1429 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 KRT34O76011 436 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 LCA5LO95447 670 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 PLA2G4FQ68DD2 849 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 HAS1Q92839 578 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 FAM149B1Q96BN6 582 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 GABBR1Q9UBS5 961 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 CALB2P22676 271 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 CENPCQ03188 943 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 RPS6KA2Q15349 733 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 THEMIS2Q5TEJ8 643 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ZNF720Q7Z2F6 126 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 STK32AQ8WU08 396 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 HES6Q96HZ4 224 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 SERPINI1Q99574 410 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 SENP7Q9BQF6 1050 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 UBE4BO95155 1302 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 NUDT17P0C025 328 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ACADSP16219 412 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 PTPN4P29074 926 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 RFC5P40937 340 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 MMP13P45452 471 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 C11orf63Q6NUN7 778 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ANO5Q75V66 913 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ARHGEF19Q8IW93 802 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ANKRD36BP1Q96IX9 119 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 ADPGKQ9BRR6 497 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 GPRC5CQ9NQ84 441 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 A1CFQ9NQ94 594 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 NR2E1Q9Y466 385 aa13.85□□□□□ -0.19
TRAPPC9-201ENST00000389328 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 DNAJC6O75061 913 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 GMNNO75496 209 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 AP1G2O75843 785 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 CKAP2Q8WWK9 683 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 KAT5Q92993 513 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 RBAKQ9NYW8 714 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 FOXO6A8MYZ6 492 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ENTPD5O75356 428 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 UPP2O95045 317 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 KRT7P08729 469 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ESRRGP62508 458 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 DEUP1Q05D60 604 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 TBC1D16Q8TBP0 767 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ALKBH8Q96BT7 664 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 RTFDC1Q9BY42 306 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 FOXP3Q9BZS1 431 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 RNPEPL1Q9HAU8 725 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 GZMAP12544 262 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ATXN3P54252 364 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ANKRD20A4Q4UJ75 823 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 SWSAP1Q6NVH7 229 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRIM72Q6ZMU5 477 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 MED7O43513 233 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 CST8O60676 142 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 APRTP07741 180 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 CDH6P55285 790 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 IGBP1P78318 339 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 TFDP2Q14188 446 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 PKN2Q16513 984 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 CDC42EP5Q6NZY7 148 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 FAM160B2Q86V87 743 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 LDHDQ86WU2 507 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 ZNF668Q96K58 619 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 PPP1R36Q96LQ0 422 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms