RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 TAF1CQ15572 869 aaPredicted RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 PCSK1P29120 753 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ALDH18A1P54886 795 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 INPP5AQ14642 412 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 CATSPER1Q8NEC5 780 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 PDHA1P08559 390 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SGSM1Q2NKQ1 1148 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 PCDHGB4Q9UN71 923 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ANO5Q75V66 913 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 MTIF3Q9H2K0 278 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 MED12Q93074 2177 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 PHF2O75151 1096 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SYF2O95926 243 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 POLE2P56282 527 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 CD163L1Q9NR16 1453 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CTSHP09668 335 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 GPRC5AQ8NFJ5 357 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 RUBCNLQ9H714 662 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 EFCAB14O75071 495 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 RALBP11234 206 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 TLR2O60603 784 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CCDC22O60826 627 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 C6orf222P0C671 652 aaPredicted RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 SESN2P58004 480 aaPredicted RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 PIGHQ14442 188 aaPredicted RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 IER5Q5VY09 327 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CYP4F11Q9HBI6 524 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 XRRA1Q6P2D8 792 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 HDAC4P56524 1084 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 LIMA1Q9UHB6 759 aaKnown RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CFAP73A6NFT4 308 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CHUKO15111 745 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 SNX31Q8N9S9 440 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 TADA2AO75478 443 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 CD4P01730 458 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 EPHA7Q15375 998 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 STOX1Q6ZVD7 989 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 SFMBT1Q9UHJ3 866 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 GRAP2O75791 330 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
KCNQ3-201ENST00000388996 SERPINB10P48595 397 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 TSC22D3Q99576 134 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 UNC45AQ9H3U1 944 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 LATS2Q9NRM7 1088 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 MYL2P10916 166 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 BRAFP15056 766 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 TWF1Q12792 350 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 C16orf86Q6ZW13 317 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SLC35G2Q8TBE7 412 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 WWP1Q9H0M0 922 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 ZNF197O14709 1029 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 ATF7IP2Q5U623 682 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 RBM15Q96T37 977 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 KIF2CQ99661 725 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 FAM49BQ9NUQ9 324 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 SNX9Q9Y5X1 595 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 STAT4Q14765 748 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PATL1Q86TB9 770 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 FOXN1O15353 648 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 HSPA9P38646 679 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 STKLD1Q8NE28 680 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 CPS1P31327 1500 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 DAB2P98082 770 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 CNGA3Q16281 694 aa12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
KCNQ3-201ENST00000388996 ANKMY2Q8IV38 441 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms