RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 FAM90A1Q86YD7 464 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 MIER2Q8N344 545 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 CPEB3Q8NE35 698 aaKnown RBP3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 NACC2Q96BF6 587 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 HOOK2Q96ED9 719 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 HSPBAP1Q96EW2 488 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 CLPTM1LQ96KA5 538 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 AIFM3Q96NN9 605 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 PNKPQ96T60 521 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 MRIQ9BWK5 157 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 RHOBTB2Q9BYZ6 727 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 REXO4Q9GZR2 422 aaKnown RBP3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 TOR3AQ9H497 397 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 SERHL2Q9H4I8 314 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 GSTO2Q9H4Y5 243 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 GPR35Q9HC97 309 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 ANKRD6Q9Y2G4 727 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 NEU2Q9Y3R4 380 aa3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 USP15Q9Y4E8 981 aaPredicted RBP3.06□□□□□ -1.92
RNU6-541P-201ENST00000384709 MAST3O60307 1309 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 WDR33Q9C0J8 1336 aaKnown RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 A0A1W2PS29 197 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 TCRBV7S2A1N4TA0A589 114 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 F2RL2O00254 374 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 GRM6O15303 877 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 AKAP10O43572 662 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 CDKL5O76039 1030 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 ZFPL1O95159 310 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 SPDEFO95238 335 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 FGFR4P22455 802 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 DDX6P26196 483 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 PRDX5P30044 214 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 ADRA1BP35368 520 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 IL12RB1P42701 662 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 EPHB1P54762 984 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 NOMO3P69849 1222 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 NKX6-1P78426 367 aaPredicted RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 GUCY1B3Q02153 619 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 RESTQ13127 1097 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 PIN1Q13526 163 aaPredicted RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 UAP1L1Q3KQV9 507 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 KHDC1Q4VXA5 237 aaKnown RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 NOMO2Q5JPE7 1267 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 TSHZ3Q63HK5 1081 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 SP5Q6BEB4 398 aaPredicted RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 KCNV1Q6PIU1 500 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 B3GNT9Q6UX72 402 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 Q6YL49 198 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 UBE3BQ7Z3V4 1068 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 C3orf20Q8ND61 904 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 NEU4Q8WWR8 484 aaPredicted RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 KAT5Q92993 513 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 HPS3Q969F9 1004 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 CHFRQ96EP1 664 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 FAM167AQ96KS9 214 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 GTPBP4Q9BZE4 634 aaKnown RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 CDH19Q9H159 772 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 IKZF4Q9H2S9 585 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 SLC12A5Q9H2X9 1139 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 WDCPQ9H6R7 721 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 MAN1C1Q9NR34 630 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 VSX1Q9NZR4 365 aaPredicted RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 CTTNBP2NLQ9P2B4 639 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 HSFX1Q9UBD0 423 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 PACSIN3Q9UKS6 424 aa3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 LUC7L2Q9Y383 392 aaKnown RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 REXO2Q9Y3B8 237 aaKnown RBP3.05□□□□□ -1.92
RNU6-541P-201ENST00000384709 SPATA31A3Q5VYP0 1347 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 PROM1O43490 865 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 B3GALT2O43825 422 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 DTNBO60941 627 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 RHOBTB3O94955 611 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 NDUFA10O95299 355 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 FOSP01100 380 aaPredicted RBP3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 GCP02774 474 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 FCER1AP12319 257 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 VAV2P52735 878 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 HMGA2P52926 109 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 CXADRP78310 365 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 CREMQ03060 361 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 GTF2H3Q13889 308 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 KIF22Q14807 665 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 PLEKHG6Q3KR16 790 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 EMC10Q5UCC4 262 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 KIAA0895LQ68EN5 471 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 LAIR1Q6GTX8 287 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 SLC4A10Q6U841 1118 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 GPR149Q86SP6 731 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 RSPH3Q86UC2 560 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 LNX2Q8N448 690 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 POC1BQ8TC44 478 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 SLC9A6Q92581 669 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 SCAMP4Q969E2 229 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 C1GALT1C1Q96EU7 318 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 MARS2Q96GW9 593 aaKnown RBP3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 KLHL32Q96NJ5 620 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 FAM193BQ96PV7 902 aaPredicted RBP3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 CEP89Q96ST8 783 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 AGAP2Q99490 1192 aa3.04□□□□□ -1.92
RNU6-541P-201ENST00000384709 SMAD5Q99717 465 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms