RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NELFBQ8WX92 580 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 EEF2KMTQ96G04 330 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 TSPAN18Q96SJ8 248 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 POP1Q99575 1024 aaKnown RBP17.5■□□□□ 0.39
SNRPB-201ENST00000381342 TSG101Q99816 390 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 HERC2P3Q9BVR0 1158 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 GPR62Q9BZJ7 368 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 MTMR12Q9C0I1 747 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 ZBP1Q9H171 429 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 SF3B1O75533 1304 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■■ 137.9
SNRPB-201ENST00000381342 CUL9Q8IWT3 2517 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 TADA2AO75478 443 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 EFEMP2O95967 443 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 DLATP10515 647 aaKnown RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CYP3A5P20815 502 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CCNE1P24864 410 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 LRPAP1P30533 357 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 PPP1R2P41236 205 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 MYBPC2Q14324 1141 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CD300LGQ6UXG3 332 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 RNF168Q8IYW5 571 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 PLEKHO2Q8TD55 490 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CCDC127Q96BQ5 260 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 DDX27Q96GQ7 796 aaKnown RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 DHTKD1Q96HY7 919 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 B3GALT6Q96L58 329 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 CGRRF1Q99675 332 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 GZF1Q9H116 711 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-201ENST00000381342 TMEM63CQ9P1W3 806 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 FRMD4BQ9Y2L6 1034 aa17.49■□□□□ 0.39
SNRPB-201ENST00000381342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 I3L4J1 428 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 TBX10O75333 385 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 AKAP3O75969 853 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 SOD2P04179 222 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 TMEM191BP0C7N4 346 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 RPL13P26373 211 aaKnown RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 RPL9P32969 192 aaKnown RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 BRCC3P46736 316 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 STX17P56962 302 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 LRRC63Q05C16 580 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 PAK1Q13153 545 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 ADAM9Q13443 819 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 SMAD2Q15796 467 aaKnown RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 DPCR1Q3MIW9 517 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 NT5DC4Q86YG4 428 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 FAM186BQ8IYM0 893 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 CASP10Q92851 521 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 MFSD14AQ96MC6 490 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 C1QTNF1Q9BXJ1 281 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 DPP3Q9NY33 737 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 BARX2Q9UMQ3 279 aaPredicted RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 SSX2IPQ9Y2D8 614 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.48■□□□□ 0.39
SNRPB-201ENST00000381342 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SNRPB-201ENST00000381342 BRWD1Q9NSI6 2320 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 CTSAP10619 480 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 SURF1Q15526 300 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 C9orf57Q5W0N0 161 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 TTI2Q6NXR4 508 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
SNRPB-201ENST00000381342 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 ADHFE1Q8IWW8 467 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 ZC3H3Q8IXZ2 948 aaKnown RBP17.47■□□□□ 0.39
SNRPB-201ENST00000381342 C1orf127Q8N9H9 656 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 ANKRD36BP1Q96IX9 119 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 MSLNLQ96KJ4 702 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 FNBP1Q96RU3 617 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 DUSP9Q99956 384 aaKnown RBP17.47■□□□□ 0.39
SNRPB-201ENST00000381342 EMILIN2Q9BXX0 1053 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 NUB1Q9Y5A7 615 aa17.47■□□□□ 0.39
SNRPB-201ENST00000381342 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 C2orf71A6NGG8 1288 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.39
SNRPB-201ENST00000381342 C2CD2LO14523 706 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 CETN3O15182 167 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 TNNC2P02585 160 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 ITGB3P05106 788 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 URODP06132 367 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 HOXB8P17481 243 aaPredicted RBP17.46■□□□□ 0.39
SNRPB-201ENST00000381342 TNNI1P19237 187 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 POLR2BP30876 1174 aaKnown RBP17.46■□□□□ 0.39
SNRPB-201ENST00000381342 GLUD2P49448 558 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 NLRP12P59046 1061 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 DLG4P78352 724 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 PTPN14Q15678 1187 aa17.46■□□□□ 0.39
SNRPB-201ENST00000381342 SCARA3Q6AZY7 606 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms