RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
SMN2-203ENST00000380743 ZNF18P17022 549 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
SMN2-203ENST00000380743 AP3M2P53677 418 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 ZACNQ401N2 412 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 SLC39A11Q8N1S5 342 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 IGSF21Q96ID5 467 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 AGAP1Q9UPQ3 857 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
SMN2-203ENST00000380743 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
SMN2-203ENST00000380743 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 FGF18O76093 207 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 VNN1O95497 513 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 KRT19P08727 400 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
SMN2-203ENST00000380743 GTF2H1P32780 548 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
SMN2-203ENST00000380743 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 BIRC3Q13489 604 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 CBWD6Q4V339 395 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 CBWD3Q5JTY5 395 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 HABP4Q5JVS0 413 aaKnown RBP13.66□□□□□ -0.22
SMN2-203ENST00000380743 CBWD5Q5RIA9 395 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
SMN2-203ENST00000380743 ADAM28Q9UKQ2 775 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMN2-203ENST00000380743 NLRC5Q86WI3 1866 aa13.66□□□□□ -0.22
SMN2-203ENST00000380743 EPOPA6NHQ4 379 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 TMEM189-UBE2V1I3L0A0 370 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 SPTLC1O15269 473 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 STX10O60499 249 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 TADA2AO75478 443 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 PPM1AP35813 382 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 LILRA4P59901 499 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 RBP5P82980 135 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 KRT39Q6A163 491 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 TAS1R2Q8TE23 839 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 SAMD11Q96NU1 681 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
SMN2-203ENST00000380743 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
SMN2-203ENST00000380743 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
SMN2-203ENST00000380743 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 I3L4J1 428 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 LRRN2O75325 713 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 EFEMP2O95967 443 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 AFPP02771 609 aaKnown RBP13.64□□□□□ -0.23
SMN2-203ENST00000380743 RB1P06400 928 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
SMN2-203ENST00000380743 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
SMN2-203ENST00000380743 BRCC3P46736 316 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 FMO5P49326 533 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 MXI1P50539 228 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 MYL6P60660 151 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 NCOA4Q13772 614 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 KRT31Q15323 416 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
SMN2-203ENST00000380743 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 SCN1AP35498 2009 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 H3BNC9 293 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 DNAJB1P25685 340 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMN2-203ENST00000380743 TRPC3Q13507 836 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 MAN2A1Q16706 1144 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 VWA3BQ502W6 1294 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 FUT10Q6P4F1 479 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
SMN2-203ENST00000380743 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 HPDLQ96IR7 371 aa13.64□□□□□ -0.23
SMN2-203ENST00000380743 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms