RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 C3orf58Q8NDZ4 430 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 VPS16Q9H269 839 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 NKX2-4Q9H2Z4 354 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 MSRAQ9UJ68 235 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 AGAP1Q9UPQ3 857 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 FAN1Q9Y2M0 1017 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 PRG3Q9Y2Y8 225 aaPredicted RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 CHD7Q9P2D1 2997 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 LRRC10BA6NIK2 292 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 ITGB1P05556 798 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 KRT19P08727 400 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 ALDH7A1P49419 539 aaKnown RBP20.27■□□□□ 0.84
SMN2-202ENST00000380742 COPB1P53618 953 aaKnown RBP20.27■□□□□ 0.84
SMN2-202ENST00000380742 TPM4P67936 248 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 TAP1Q03518 808 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 TMEM173Q86WV6 379 aaPredicted RBP20.27■□□□□ 0.84
SMN2-202ENST00000380742 TAS1R2Q8TE23 839 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 MARCH5Q9NX47 278 aa20.27■□□□□ 0.84
SMN2-202ENST00000380742 VWA8A3KMH1 1905 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 PHACTR2O75167 634 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 LRRN2O75325 713 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 KIF4AO95239 1232 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 RBP5P82980 135 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 DCLRE1AQ6PJP8 1040 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 ANKRD20A12PQ8NF67 263 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 BCL7CQ8WUZ0 217 aaPredicted RBP20.26■□□□□ 0.83
SMN2-202ENST00000380742 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 NDST4Q9H3R1 872 aa20.26■□□□□ 0.83
SMN2-202ENST00000380742 PMM2O15305 246 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 B3GAT3O94766 335 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 HLA-DRAP01903 254 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 DNAJB2P25686 324 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 BMPR1AP36894 532 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 MYL7Q01449 175 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 NCOA4Q13772 614 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 SLC39A11Q8N1S5 342 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 SEMA4DQ92854 862 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 COLEC11Q9BWP8 271 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 AAASQ9NRG9 546 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 COQ4Q9Y3A0 265 aa20.25■□□□□ 0.83
SMN2-202ENST00000380742 TMEM189-UBE2V1I3L0A0 370 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 SPTLC1O15269 473 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 N4BP1O75113 896 aaKnown RBP20.24■□□□□ 0.83
SMN2-202ENST00000380742 LILRA4P59901 499 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 MYL6P60660 151 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 TRPC3Q13507 836 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 FBXL13Q8NEE6 735 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 ELMO3Q96BJ8 720 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 IGSF21Q96ID5 467 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 XYLT2Q9H1B5 865 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 PCDHB12Q9Y5F1 795 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 TSC2P49815 1807 aa20.24■□□□□ 0.83
SMN2-202ENST00000380742 P4HA2O15460 535 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 CTNNB1P35222 781 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 PIK3CAP42336 1068 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 ERVK-21P61565 698 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 FANCCQ00597 558 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 EPC2Q52LR7 807 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 PPP2R2DQ66LE6 453 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 TIFAQ96CG3 184 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 TGS1Q96RS0 853 aaKnown RBP20.23■□□□□ 0.83
SMN2-202ENST00000380742 PI4K2AQ9BTU6 479 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 SLC28A3Q9HAS3 691 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 RAB20Q9NX57 234 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 SPG21Q9NZD8 308 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 ADAM28Q9UKQ2 775 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 MTUS1Q9ULD2 1270 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 RWDD3Q9Y3V2 267 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
SMN2-202ENST00000380742 PES1O00541 588 aaKnown RBP20.22■□□□□ 0.83
SMN2-202ENST00000380742 TADA2AO75478 443 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 BRCC3P46736 316 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 TAF6P49848 677 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 KLHL23Q8NBE8 558 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 LMO3Q8TAP4 145 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 NAP1L5Q96NT1 182 aaPredicted RBP20.22■□□□□ 0.83
SMN2-202ENST00000380742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMN2-202ENST00000380742 R3HCC1Q9Y3T6 440 aaKnown RBP20.22■□□□□ 0.83
SMN2-202ENST00000380742 ATG2AQ2TAZ0 1938 aa20.22■□□□□ 0.83
SMN2-202ENST00000380742 COL4A4P53420 1690 aaPredicted RBP20.22■□□□□ 0.83
SMN2-202ENST00000380742 CARNS1A5YM72 827 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 LGALS16A8MUM7 142 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 I3L4J1 428 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 STAU1O95793 577 aaKnown RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 EFEMP2O95967 443 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 ASS1P00966 412 aaKnown RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 SERPINC1P01008 464 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 TPM2P07951 284 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 PPM1AP35813 382 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 PNPLA4P41247 253 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 AARSP49588 968 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMN2-202ENST00000380742 SGSM1Q2NKQ1 1148 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 SV2CQ496J9 727 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms