RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZNF512Q96ME7 567 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-202ENST00000380276 TBC1D32Q96NH3 1257 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 GVINP1Q7Z2Y8 2422 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 CITO14578 2027 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 PROZP22891 400 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 TOB1P50616 345 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-202ENST00000380276 FAM78AQ5JUQ0 283 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 TPGS2Q68CL5 300 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 POTEHQ6S545 545 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 C1orf186Q6ZWK4 172 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 HS6ST3Q8IZP7 471 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 DDX12PQ92771 950 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 DNASE1L2Q92874 299 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 SUSD3Q96L08 255 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 PLIN2Q99541 437 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 TRMT61BQ9BVS5 477 aaKnown RBP25.23■■□□□ 1.63
U2AF1-202ENST00000380276 C17orf75Q9HAS0 396 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 SH2B1Q9NRF2 756 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-202ENST00000380276 TUBGCP4Q9UGJ1 667 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 PCDHGA2Q9Y5H1 932 aa25.23■■□□□ 1.63
U2AF1-202ENST00000380276 CACNA1IQ9P0X4 2223 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 TBC1D4O60343 1298 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 GJA1P17302 382 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 FCARP24071 287 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 CCR2P41597 374 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 SMTNP53814 917 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 SPAG1Q07617 926 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 PUM1Q14671 1186 aaKnown RBP eCLIP25.22■■□□□ 1.63
U2AF1-202ENST00000380276 MCTP1Q6DN14 999 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 SECISBP2LQ93073 1101 aaKnown RBP25.22■■□□□ 1.63
U2AF1-202ENST00000380276 BICD1Q96G01 975 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 ZSCAN32Q9NX65 697 aa25.22■■□□□ 1.63
U2AF1-202ENST00000380276 MED19A0JLT2 244 aaPredicted RBP25.21■■□□□ 1.63
U2AF1-202ENST00000380276 LAD1O00515 517 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 ABLIM1O14639 778 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 TOM1L1O75674 476 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 U2AF2P26368 475 aaKnown RBP eCLIP25.21■■□□□ 1.63
U2AF1-202ENST00000380276 GDI1P31150 447 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 MRPL58Q14197 206 aaKnown RBP25.21■■□□□ 1.63
U2AF1-202ENST00000380276 IL17AQ16552 155 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 CLDN23Q96B33 292 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 CDK5RAP3Q96JB5 506 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 TIPINQ9BVW5 301 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 SLITRK6Q9H5Y7 841 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 ASAH2Q9NR71 780 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 AFF4Q9UHB7 1163 aaKnown RBP25.21■■□□□ 1.63
U2AF1-202ENST00000380276 PCDHB8Q9UN66 801 aa25.21■■□□□ 1.63
U2AF1-202ENST00000380276 CLDN3O15551 220 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 CXCL8P10145 99 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 RPS9P46781 194 aaKnown RBP25.2■■□□□ 1.62
U2AF1-202ENST00000380276 SLC10A6Q3KNW5 377 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 RNF19BQ6ZMZ0 732 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 IRF7Q92985 503 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 ASB16Q96NS5 453 aa25.2■■□□□ 1.62
U2AF1-202ENST00000380276 SMG5Q9UPR3 1016 aaKnown RBP25.2■■□□□ 1.62
U2AF1-202ENST00000380276 TIMM13Q9Y5L4 95 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-202ENST00000380276 MAN2B1O00754 1011 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 MEFVO15553 781 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-202ENST00000380276 PLS3P13797 630 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 GUCY2CP25092 1073 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 PRPHP41219 470 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 CACNB1Q02641 598 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-202ENST00000380276 YWHAHQ04917 246 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-202ENST00000380276 MTAPQ13126 283 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 RSPO4Q2I0M5 234 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-202ENST00000380276 TMEM130Q8N3G9 435 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 SMARCD2Q92925 531 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 KIF12Q96FN5 646 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 BORCS6Q96GS4 357 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 ZSWIM3Q96MP5 696 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 PGLYRP2Q96PD5 576 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 MMTAG2Q9BU76 263 aaKnown RBP25.19■■□□□ 1.62
U2AF1-202ENST00000380276 CEP72Q9P209 647 aa25.19■■□□□ 1.62
U2AF1-202ENST00000380276 NRG2O14511 850 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-202ENST00000380276 MICAL2O94851 1124 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 PSMC3P17980 439 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 VIPR2P41587 438 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 VITQ6UXI7 678 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 DSTYKQ6XUX3 929 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 USP37Q86T82 979 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 TMEM161BQ8NDZ6 487 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 ZSCAN18Q8TBC5 510 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-202ENST00000380276 SPIRE2Q8WWL2 714 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 FAM3CQ92520 227 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.18■■□□□ 1.62
U2AF1-202ENST00000380276 KCNG1Q9UIX4 513 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 YIPF1Q9Y548 306 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 EP300Q09472 2414 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-202ENST00000380276 DCHS1Q96JQ0 3298 aa25.18■■□□□ 1.62
U2AF1-202ENST00000380276 PDCD11Q14690 1871 aaKnown RBP25.17■■□□□ 1.62
U2AF1-202ENST00000380276 MYH11P35749 1972 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 ZNF263O14978 683 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 OR4Q2P0C623 313 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 MAPTP10636 758 aaKnown RBP25.17■■□□□ 1.62
U2AF1-202ENST00000380276 TEAD2Q15562 447 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 ZPBP2Q6X784 338 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 YAF2Q8IY57 180 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 LEMD2Q8NC56 503 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 ZBTB44Q8NCP5 570 aa25.17■■□□□ 1.62
U2AF1-202ENST00000380276 DEPDC1BQ8WUY9 529 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms