RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 PSMC2P35998 433 aaKnown RBP28.95■■■□□ 2.22
ATRAID-201ENST00000380171 FKBP3Q00688 224 aaKnown RBP28.95■■■□□ 2.22
ATRAID-201ENST00000380171 PTPN14Q15678 1187 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 DUOXA2Q1HG44 320 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 C1orf127Q8N9H9 656 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 MLKLQ8NB16 471 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 OR5B17Q8NGF7 314 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 MRPL17Q9NRX2 175 aaKnown RBP28.95■■■□□ 2.22
ATRAID-201ENST00000380171 ITGA11Q9UKX5 1188 aa28.95■■■□□ 2.22
ATRAID-201ENST00000380171 ANO9A1A5B4 782 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 ITGB3P05106 788 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 EPB41P11171 864 aaKnown RBP28.94■■■□□ 2.22
ATRAID-201ENST00000380171 KRT13P13646 458 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 POLR2BP30876 1174 aaKnown RBP28.94■■■□□ 2.22
ATRAID-201ENST00000380171 STX17P56962 302 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.94■■■□□ 2.22
ATRAID-201ENST00000380171 RBM43Q6ZSC3 357 aaKnown RBP28.94■■■□□ 2.22
ATRAID-201ENST00000380171 CEP57Q86XR8 500 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 PLEKHO2Q8TD55 490 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 ZNF560Q96MR9 790 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 POP1Q99575 1024 aaKnown RBP28.94■■■□□ 2.22
ATRAID-201ENST00000380171 MKNK1Q9BUB5 465 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 SSX2IPQ9Y2D8 614 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 SCN1AP35498 2009 aa28.94■■■□□ 2.22
ATRAID-201ENST00000380171 C2orf71A6NGG8 1288 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 KRT19P08727 400 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 NRIP1P48552 1158 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 NLRP12P59046 1061 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 DSG1Q02413 1049 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 SKIV2LQ15477 1246 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 DPCR1Q3MIW9 517 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 TTI2Q6NXR4 508 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 INTS8Q75QN2 995 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 USP37Q86T82 979 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 RBM23Q86U06 439 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 ZC3H3Q8IXZ2 948 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 MRPL43Q8N983 215 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 PARD3BQ8TEW8 1205 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 RIN2Q8WYP3 895 aaPredicted RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 SYAP1Q96A49 352 aaPredicted RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 TTPALQ9BTX7 342 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 GZF1Q9H116 711 aaPredicted RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 TLE6Q9H808 572 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 CHST7Q9NS84 486 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 TMEM63CQ9P1W3 806 aa28.93■■■□□ 2.22
ATRAID-201ENST00000380171 R3HCC1Q9Y3T6 440 aaKnown RBP28.93■■■□□ 2.22
ATRAID-201ENST00000380171 TSC2P49815 1807 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 LRRIQ3A6PVS8 624 aaPredicted RBP28.92■■■□□ 2.22
ATRAID-201ENST00000380171 PIRO00625 290 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 SLC16A3O15427 465 aaKnown RBP28.92■■■□□ 2.22
ATRAID-201ENST00000380171 TKTP29401 623 aaKnown RBP28.92■■■□□ 2.22
ATRAID-201ENST00000380171 RTP2Q5QGT7 225 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 CAVIN1Q6NZI2 390 aaKnown RBP28.92■■■□□ 2.22
ATRAID-201ENST00000380171 CSGALNACT2Q8N6G5 542 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 TMC2Q8TDI7 906 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 SUSD3Q96L08 255 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 DACH1Q9UI36 760 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 AGAP1Q9UPQ3 857 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 IRAK3Q9Y616 596 aa28.92■■■□□ 2.22
ATRAID-201ENST00000380171 FGFR3P22607 806 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 TAF6P49848 677 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 VAMP7P51809 220 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 HYAL1Q12794 435 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 FOXR2Q6PJQ5 311 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 DSTYKQ6XUX3 929 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 DUSP9Q99956 384 aaKnown RBP28.91■■■□□ 2.22
ATRAID-201ENST00000380171 EMILIN2Q9BXX0 1053 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 IGFLR1Q9H665 355 aa28.91■■■□□ 2.22
ATRAID-201ENST00000380171 PNPLA4P41247 253 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 LILRA4P59901 499 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 DLG4P78352 724 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 RBP5P82980 135 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 BFSP1Q12934 665 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 SV2CQ496J9 727 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 KIAA0319Q5VV43 1072 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 PRSS55Q6UWB4 352 aaPredicted RBP28.9■■■□□ 2.22
ATRAID-201ENST00000380171 TRAPPC11Q7Z392 1133 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 CEP63Q96MT8 703 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 SIX4Q9UIU6 781 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 RWDD2AQ9UIY3 292 aa28.9■■■□□ 2.22
ATRAID-201ENST00000380171 SYN3O14994 580 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PER2O15055 1255 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PAX3P23760 479 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 GTF2F1P35269 517 aaKnown RBP eCLIP28.89■■■□□ 2.22
ATRAID-201ENST00000380171 AARSP49588 968 aaKnown RBP eCLIP28.89■■■□□ 2.22
ATRAID-201ENST00000380171 AP3M2P53677 418 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 CREMQ03060 361 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 BIRC3Q13489 604 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PSMD5Q16401 504 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 DUSP6Q16828 381 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 KLHL40Q2TBA0 621 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PDXDC1Q6P996 788 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 SASS6Q6UVJ0 657 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 LRRC52Q8N7C0 313 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PIK3R5Q8WYR1 880 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 CDCA3Q99618 268 aaPredicted RBP28.89■■■□□ 2.22
ATRAID-201ENST00000380171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.89■■■□□ 2.22
ATRAID-201ENST00000380171 PCDHB8Q9UN66 801 aa28.89■■■□□ 2.22
ATRAID-201ENST00000380171 SPTLC1O15269 473 aa28.88■■■□□ 2.21
ATRAID-201ENST00000380171 PHACTR2O75167 634 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms