RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ZNF287Q9HBT7 754 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ANLNQ9NQW6 1124 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 FBXO6Q9NRD1 293 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 SIK3Q9Y2K2 1263 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PTPN22Q9Y2R2 807 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PCDHB2Q9Y5E7 798 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 GOLGA8IPA6NC78 632 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 FAM187AA6NFU0 413 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 B4E1Z4 1266 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 F8W8V4 182 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 GRM8O00222 908 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 NR1H2P55055 460 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 MTMR2Q13614 643 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 TRIM16LQ309B1 348 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 TRMT5Q32P41 509 aaKnown RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PCNX4Q63HM2 1172 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 C4orf22Q6V702 233 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PPP1R14CQ8TAE6 165 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 TRPC4APQ8TEL6 797 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 DDI1Q8WTU0 396 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 OSBP2Q969R2 916 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PRR11Q96HE9 360 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CCDC138Q96M89 665 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CDC42EP4Q9H3Q1 356 aaKnown RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 MARCH7Q9H992 704 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 FKBP14Q9NWM8 211 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ARMCX1Q9P291 453 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CEPT1Q9Y6K0 416 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 MYH4Q9Y623 1939 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PTPRUQ92729 1446 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CAPN8A6NHC0 703 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PSMD11O00231 422 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 C2CD2LO14523 706 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 GMNNO75496 209 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 MYCP01106 439 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CCNE1P24864 410 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 STAT2P52630 851 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PTENP60484 403 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 OTOAQ7RTW8 1153 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 NLRX1Q86UT6 975 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ANKRD13BQ86YJ7 626 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 CLVS1Q8IUQ0 354 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ALDH16A1Q8IZ83 802 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 C12orf50Q8NA57 414 aaPredicted RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 SPATA5Q8NB90 893 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PTCD3Q96EY7 689 aaKnown RBP8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 Q9H521 79 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PARP2Q9UGN5 583 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ERVK-11Q9UQG0 969 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 PCDHGA8Q9Y5G5 932 aa8.97□□□□□ -0.97
NHLRC3-201ENST00000379599 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 BTBD11A6QL63 1104 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 B3GALNT1O75752 331 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 RBP3P10745 1247 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 CHKAP35790 457 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 IST1P53990 364 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 KRT76Q01546 638 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 PTK2Q05397 1052 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 CALCOCO2Q13137 446 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 PSMD6Q15008 389 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 TLR1Q15399 786 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 TWF2Q6IBS0 349 aaKnown RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 NET1Q7Z628 596 aaPredicted RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 AMIGO2Q86SJ2 522 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 RHOT2Q8IXI1 618 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 REM2Q8IYK8 340 aaPredicted RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 NATD1Q8N6N6 113 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 Q8N9G6 341 aaPredicted RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 RFWD2Q8NHY2 731 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 FAM172AQ8WUF8 416 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 C18orf8Q96DM3 657 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 CSRNP1Q96S65 589 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 CTRCQ99895 268 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 ERVK-5Q9HDB9 667 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 CCDC177Q9NQR7 707 aaPredicted RBP8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 ZDHHC7Q9NXF8 308 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 KLHL3Q9UH77 587 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 EXOC7Q9UPT5 735 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 ATP11BQ9Y2G3 1177 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 NR2E3Q9Y5X4 410 aa8.96□□□□□ -0.97
NHLRC3-201ENST00000379599 A0A088AWK7 358 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 LINC00854A0A1B0GVQ3 168 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 J3QRK9 145 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 KMOO15229 486 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 BAIAP3O94812 1187 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 TNFAIP8O95379 198 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 DDX58O95786 925 aaKnown RBP8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 CRYZL1O95825 349 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 ENO1P06733 434 aaKnown RBP8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 SRGAP2CP0DJJ0 459 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 SRGAP2BP0DMP2 458 aa8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 ADSLP30566 484 aaPredicted RBP8.96□□□□□ -0.98
NHLRC3-201ENST00000379599 PIK3CAP42336 1068 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms