RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PNPLA4P41247 253 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 VAMP7P51809 220 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 WNT7BP56706 349 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 STX17P56962 302 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 BFSP1Q12934 665 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 VPS52Q8N1B4 723 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 REV3LO60673 3130 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 TRANK1O15050 2925 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 LRRIQ3A6PVS8 624 aaPredicted RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 PIRO00625 290 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 EFEMP2O95967 443 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 ITGB3P05106 788 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 IGFBP4P22692 258 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 DNAJB1P25685 340 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 MCCD1P59942 119 aaPredicted RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 RBP5P82980 135 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 USP41Q3LFD5 358 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 FRMD5Q7Z6J6 570 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 LRRC52Q8N7C0 313 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 CACNG4Q9UBN1 327 aa12.87□□□□□ -0.35
PCNA-201ENST00000379143 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
PCNA-201ENST00000379143 PTPRJQ12913 1337 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 F8W810 466 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 URODP06132 367 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 CTSAP10619 480 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 GTF2H1P32780 548 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 TAF6P49848 677 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 GUCY2FP51841 1108 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 LILRA4P59901 499 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 CREMQ03060 361 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 TYRO3Q06418 890 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 CAMK1Q14012 370 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 SV2CQ496J9 727 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 TRAPPC11Q7Z392 1133 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 C3orf58Q8NDZ4 430 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 GPR62Q9BZJ7 368 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 GZF1Q9H116 711 aaPredicted RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 ZBP1Q9H171 429 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
PCNA-201ENST00000379143 CHST7Q9NS84 486 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
PCNA-201ENST00000379143 TNFRSF10AO00220 468 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 FSCN2O14926 492 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 SYN3O14994 580 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 PHACTR2O75167 634 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 KRT19P08727 400 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
PCNA-201ENST00000379143 GLUD2P49448 558 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCNA-201ENST00000379143 MARSP56192 900 aaKnown RBP12.85□□□□□ -0.35
PCNA-201ENST00000379143 ERVFC1P60507 584 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 DLG4P78352 724 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 DSG1Q02413 1049 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 TRPC3Q13507 836 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 ZACNQ401N2 412 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms