RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 CEP19Q96LK0 163 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 GPR63Q9BZJ6 419 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RGL2O15211 777 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PSMD3O43242 534 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 DDHD2O94830 711 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 NR1D1P20393 614 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ETFBP38117 255 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PPP3CCP48454 512 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 C1orf54Q8WWF1 131 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 SPATA16Q9BXB7 569 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 A0A087WUV0 522 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ALDH1A2O94788 518 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 CPA5Q8WXQ8 436 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 STX18Q9P2W9 335 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 UBQLN1Q9UMX0 589 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 HDLBPQ00341 1268 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 LAMB3Q13751 1172 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 EFTUD2Q15029 972 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 SNCBQ16143 134 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RFFLQ8WZ73 363 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ABHD8Q96I13 439 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 TRIM4Q9C037 500 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 SCHIP1Q9P0W5 487 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PFDN1O60925 122 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 MBL2P11226 248 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 NCAM1P13591 858 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 CAP2P40123 477 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 FBXO33Q7Z6M2 555 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PLAAQ9Y263 795 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 MSCO60682 206 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RNASEH1O60930 286 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 SLC11A2P49281 568 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ARSEP51690 589 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 GRAMD1BQ3KR37 738 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PTRHD1Q6GMV3 140 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 CDR2LQ86X02 465 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF513Q8N8E2 541 aaPredicted RBP11.49□□□□□ -0.57
LINC00654-201ENST00000379053 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RUBCNLQ9H714 662 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PKP3Q9Y446 797 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 PCDHB12Q9Y5F1 795 aa11.49□□□□□ -0.57
LINC00654-201ENST00000379053 RTN2O75298 545 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 DDNO94850 711 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 PDCLQ13371 301 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 KIZQ2M2Z5 673 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SPDYAQ5MJ70 313 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 MMS22LQ6ZRQ5 1243 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 FAM47EQ6ZV65 393 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SLC30A5Q8TAD4 765 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 NRBF2Q96F24 287 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 PRMT6Q96LA8 375 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 GPR75-ASB3A0A0A6YYF3 556 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 GOLGA7BQ2TAP0 167 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 IZUMO3Q5VZ72 239 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 EMBQ6PCB8 327 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 OTULINQ96BN8 352 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 FBXL5Q9UKA1 691 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SLC1A1P43005 524 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SLC25A41Q8N5S1 370 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 MAD2L2Q9UI95 211 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 FAM47DPA6NHR8 397 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 C5orf58C9J3I9 102 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 WEE2P0C1S8 567 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 NPEPPSP55786 919 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 BACE1P56817 501 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SNF8Q96H20 258 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 ARHGEF38Q9NXL2 777 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 LUC7L3O95232 432 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF177Q13360 481 aaPredicted RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms