RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 UGCGQ16739 394 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 FYB2Q5VWT5 728 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 GLT1D1Q96MS3 346 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 DHX35Q9H5Z1 703 aaKnown RBP15.02■□□□□ -0
SHROOM1-203ENST00000378679 ZNF446Q9NWS9 450 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 GLTPD2A6NH11 291 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 MANSC4A6NHS7 340 aaPredicted RBP15.02■□□□□ -0
SHROOM1-203ENST00000378679 EPHB6O15197 1021 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 GGCXP38435 758 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 SLC12A2P55011 1212 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 BCAR1P56945 870 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 SIAH1Q8IUQ4 282 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 CPB2Q96IY4 423 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 CGRRF1Q99675 332 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 FGFBP2Q9BYJ0 223 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 IKZF4Q9H2S9 585 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 SLC12A6Q9UHW9 1150 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 PLAAQ9Y263 795 aa15.02■□□□□ -0
SHROOM1-203ENST00000378679 SPDYE5A6NIY4 337 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 SPATA31C2B4DYI2 1134 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 FZD9O00144 591 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 CD4P01730 458 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 TAP1Q03518 808 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 ORC1Q13415 861 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 MIIPQ5JXC2 388 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 RWDD4Q6NW29 188 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 ANO5Q75V66 913 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 SLC47A2Q86VL8 602 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 UBA3Q8TBC4 463 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 WDR35Q9P2L0 1181 aa15.02□□□□□ -0.01
SHROOM1-203ENST00000378679 TTI1O43156 1089 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CXCL8P10145 99 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ZNF677Q86XU0 584 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 PYROXD1Q8WU10 500 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 STK38LQ9Y2H1 464 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ASTN1O14525 1302 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 EXOC1LA0A1B0GW35 172 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 C17orf102A2RUQ5 167 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CCNE2O96020 404 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ITGA4P13612 1032 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ACAD10Q6JQN1 1059 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 OSGEPQ9NPF4 335 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 HAUS2Q9NVX0 235 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 IGLV3-22A0A075B6J6 115 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ZC3H11AO75152 810 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CPP00450 1065 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ACVR2BQ13705 512 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 C6orf163Q5TEZ5 329 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CENPUQ71F23 418 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 VSIG1Q86XK7 387 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 TMEM161BQ8NDZ6 487 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 URGCPQ8TCY9 931 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 SHISA4Q96DD7 197 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 PORCNQ9H237 461 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 SLC24A3Q9HC58 644 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 PKD1L3Q7Z443 1732 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 MYH2Q9UKX2 1941 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 FAM187AA6NFU0 413 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CREB3O43889 395 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 SAT1P21673 171 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 ELF1P32519 619 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 NME3Q13232 169 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 EFCAB13Q8IY85 973 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 SMC6Q96SB8 1091 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 SAYSD1Q9NPB0 183 aa15.01□□□□□ -0.01
SHROOM1-203ENST00000378679 A0A087WUV0 522 aaPredicted RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 A0A1B0GUA9 196 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 TARSL2A2RTX5 802 aaKnown RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 GOLGA8MH3BSY2 632 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 STAMBPO95630 424 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 FGFR4P22455 802 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 STILQ15468 1287 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 GRIK4Q16099 956 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 ZPBP2Q6X784 338 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 CLEC4DQ8WXI8 215 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 CDKL2Q92772 493 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 DPP3Q9NY33 737 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 ACKR2O00590 384 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 KCNJ1P48048 391 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 EIF3BP55884 814 aaKnown RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 GTF2BQ00403 316 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 PDE1BQ01064 536 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 CCDC6Q16204 474 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 MEA1Q16626 185 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 GEN1Q17RS7 908 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 CELF3Q5SZQ8 465 aaKnown RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 BZW1Q7L1Q6 419 aaKnown RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.01
SHROOM1-203ENST00000378679 CYFIP2Q96F07 1278 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 M0R2N6 131 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 TGFB1I1O43294 461 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 THPOP40225 353 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms