RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 SP2Q02086 613 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 KLF1Q13351 362 aaPredicted RBP20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 FAM81BQ96LP2 452 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CCDC134Q9H6E4 229 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 SLC40A1Q9NP59 571 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 A1CFQ9NQ94 594 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 CYP39A1Q9NYL5 469 aa20.78■□□□□ 0.92
SHROOM1-202ENST00000378676 WDR90Q96KV7 1748 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 SUPT20HL2P0C7V6 817 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 ITIH2P19823 946 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 CUL2Q13617 745 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 SUPT20HL1Q3ZLR7 823 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 LACTB2Q53H82 288 aaPredicted RBP20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 CCDC197Q8NCU1 140 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 STMN4Q9H169 189 aaPredicted RBP20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 STYXL1Q9Y6J8 313 aa20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 BRCA1P38398 1863 aaKnown RBP20.77■□□□□ 0.92
SHROOM1-202ENST00000378676 RASSF9O75901 435 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 GJC1P36383 396 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 SCTRP47872 440 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 POLGP54098 1239 aaPredicted RBP20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 SWT1Q5T5J6 900 aaKnown RBP20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 SCYL3Q8IZE3 742 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 ROPN1BQ9BZX4 212 aaPredicted RBP20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 ROPN1Q9HAT0 212 aaPredicted RBP20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 NEU2Q9Y3R4 380 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 PCDHB4Q9Y5E5 795 aa20.77■□□□□ 0.91
SHROOM1-202ENST00000378676 ATF2P15336 505 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 GLRA2P23416 452 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 TMEM270Q6UE05 265 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 PIGWQ7Z7B1 504 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 ZNF280CQ8ND82 737 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 MAIP1Q8WWC4 291 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 KIAA1586Q9HCI6 787 aa20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 RBAKQ9NYW8 714 aaPredicted RBP20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHROOM1-202ENST00000378676 SPATA31C2B4DYI2 1134 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ASAP2O43150 1006 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 CD58P19256 250 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 GNA15P30679 374 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 BPIFB4P59827 614 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 TGFB2P61812 414 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 PTP4A2Q12974 167 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 STRN3Q13033 797 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 KYNUQ16719 465 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 PRAMEF18Q5VWM3 479 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MIS18BP1Q6P0N0 1132 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 SYDE1Q6ZW31 735 aaPredicted RBP20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 PRUNE1Q86TP1 453 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 GRK7Q8WTQ7 553 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ADAM22Q9P0K1 906 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ANKFY1Q9P2R3 1169 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ADAMTS5Q9UNA0 930 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 USTQ9Y2C2 406 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MGAMO43451 1857 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 LRRIQ4A6NIV6 560 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 H0YCG3 227 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 GAS8O95995 478 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 PTPRAP18433 802 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MAN1A1P33908 653 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MAMLD1Q13495 774 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 LRRC14Q15048 493 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 SEZ6Q53EL9 994 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 VSTM1Q6UX27 236 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 TAOK1Q7L7X3 1001 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MICALL2Q8IY33 904 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 RBBP8NLQ8NC74 664 aaPredicted RBP20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 OR5B17Q8NGF7 314 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 MGARPQ8TDB4 240 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 JDP2Q8WYK2 163 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 ARHGEF2Q92974 986 aaKnown RBP20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 TARS2Q9BW92 718 aaKnown RBP20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 HAUS2Q9NVX0 235 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 NINJ2Q9NZG7 142 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 NUB1Q9Y5A7 615 aa20.75■□□□□ 0.91
SHROOM1-202ENST00000378676 PSTPIP1O43586 416 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 TTC4O95801 387 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 CLTAP09496 248 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 FSTL1Q12841 308 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 ATL2Q8NHH9 583 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 WRNIP1Q96S55 665 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 CEP89Q96ST8 783 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 ELAC2Q9BQ52 826 aaKnown RBP20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 KLHL11Q9NVR0 708 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 ANAPC5Q9UJX4 755 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 VIMP08670 466 aaKnown RBP20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 ADCY8P40145 1251 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 OAZ1P54368 228 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 LIN9Q5TKA1 542 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 SERPINB12Q96P63 405 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 KDM4CQ9H3R0 1056 aa20.74■□□□□ 0.91
SHROOM1-202ENST00000378676 CCT8L1PA6NM43 557 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 PIGRP01833 764 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 OATP04181 439 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 CETPP11597 493 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 PLEKHA7Q6IQ23 1121 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms