RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SPATA31C2B4DYI2 1134 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 PRPSAP1Q14558 356 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 CPB2Q96IY4 423 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 GZMAP12544 262 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 RWDD4Q6NW29 188 aaKnown RBP15.36■□□□□ 0.05
TCOF1-202ENST00000377797 EXOC4Q96A65 974 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 GMLQ99445 158 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 FGFBP2Q9BYJ0 223 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 MAGED2Q9UNF1 606 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-202ENST00000377797 IGLV3-22A0A075B6J6 115 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 M0R2N6 131 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 GRAP2O75791 330 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 ITGA4P13612 1032 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 MSH2P43246 934 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 CCNI2Q6ZMN8 369 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-202ENST00000377797 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 ANKRD7Q92527 254 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 FAF2Q96CS3 445 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 PORCNQ9H237 461 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 ADAM21Q9UKJ8 722 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 MANSC4A6NHS7 340 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-202ENST00000377797 CXCL8P10145 99 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 GTF2BQ00403 316 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 GEN1Q17RS7 908 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 ZPBP2Q6X784 338 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 ANO5Q75V66 913 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 OSMRQ99650 979 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 TRIM51Q9BSJ1 452 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 CARD9Q9H257 536 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 DPP3Q9NY33 737 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 MNAT1P51948 309 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PDE1BQ01064 536 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PPP3CAQ08209 521 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 GPS1Q13098 491 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 TMEM161BQ8NDZ6 487 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 NFASCO94856 1347 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 SPDYE5A6NIY4 337 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 HMGB1P1B2RPK0 211 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 GOLGA8MH3BSY2 632 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 CREB3O43889 395 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 KRT14P02533 472 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 SHISA4Q96DD7 197 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 STRCP1A6NGW2 1772 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 FZD9O00144 591 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 KRT17Q04695 432 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 NME3Q13232 169 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 ORC1Q13415 861 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PIGHQ14442 188 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 GRIK4Q16099 956 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 DCAF4L1Q3SXM0 396 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 WDR49Q8IV35 697 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 ARHGEF19Q8IW93 802 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 NKRFO15226 690 aaKnown RBP eCLIP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 PEX10O60683 326 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 CCNE2O96020 404 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 SAT1P21673 171 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 CCT5P48643 541 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 KCNMA1Q12791 1236 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 KIAA1755Q5JYT7 1200 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
TCOF1-202ENST00000377797 C6orf118Q5T5N4 469 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 SIAH1Q8IUQ4 282 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 ATL2Q8NHH9 583 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 FEZF2Q8TBJ5 459 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 CYFIP2Q96F07 1278 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 GLT1D1Q96MS3 346 aa15.35■□□□□ 0.05
TCOF1-202ENST00000377797 ACKR2O00590 384 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 TGFB1I1O43294 461 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 RAD51CO43502 376 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 PMS2P54278 862 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ADCY2Q08462 1091 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ACVR2BQ13705 512 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 CLEC4DQ8WXI8 215 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 OSBPL8Q9BZF1 889 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 KLC2Q9H0B6 622 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.34■□□□□ 0.05
TCOF1-202ENST00000377797 FBXL5Q9UKA1 691 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 UBQLN1Q9UMX0 589 aaKnown RBP15.34■□□□□ 0.05
TCOF1-202ENST00000377797 DLG4P78352 724 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 CYP4A22Q5TCH4 519 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ZC3H18Q86VM9 953 aaKnown RBP15.34■□□□□ 0.05
TCOF1-202ENST00000377797 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ELF1P32519 619 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 KCNJ1P48048 391 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ARL4CP56559 192 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 CAV1Q03135 178 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-202ENST00000377797 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 IKZF4Q9H2S9 585 aa15.34■□□□□ 0.05
TCOF1-202ENST00000377797 GLTPD2A6NH11 291 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms