RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TBC1D12O60347 775 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 STK10O94804 968 aaKnown RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 CHN1P15882 459 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 ENPP1P22413 925 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 RTP1P59025 263 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 KNOP1Q1ED39 458 aaKnown RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 GALNTL6Q49A17 601 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 LMBRD2Q68DH5 695 aaPredicted RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 ASRGL1Q7L266 308 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 C11orf74Q86VG3 221 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 LRRC34Q8IZ02 419 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
FXN-201ENST00000377270 CENPKQ9BS16 269 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 BTBD7Q9P203 1132 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
FXN-201ENST00000377270 IGLV3-22A0A075B6J6 115 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 SKIP12755 728 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 VAV1P15498 845 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 UBXN2AP68543 259 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 BNIP1Q12981 228 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 FAM209AQ5JX71 171 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 TMC3Q7Z5M5 1100 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 ZC3H3Q8IXZ2 948 aaKnown RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 NUDCD1Q96RS6 583 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 CGREF1Q99674 301 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 RUSC1Q9BVN2 902 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 STK32BQ9NY57 414 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 RABGAP1Q9Y3P9 1069 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 S100A1P23297 94 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 HOXD13P35453 343 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 EAPPQ56P03 285 aaPredicted RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 NAT14Q8WUY8 206 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 ATXN2LQ8WWM7 1075 aaKnown RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 IRGQQ8WZA9 623 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
FXN-201ENST00000377270 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 PACSIN2Q9UNF0 486 aaPredicted RBP16.44■□□□□ 0.22
FXN-201ENST00000377270 SSU72P8A0A1W2PR75 194 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TRIM64CA6NLI5 447 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 CHMP2AO43633 222 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TLR2O60603 784 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 UBTFL6P0CB48 400 aaPredicted RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 ZCCHC18P0CG32 403 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 EIF3BP55884 814 aaKnown RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 EN1Q05925 392 aaPredicted RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 KIF22Q14807 665 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 NAB2Q15742 525 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 C3orf62Q6ZUJ4 267 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 EPM2AIP1Q7L775 607 aaPredicted RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 TPH2Q8IWU9 490 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SIX5Q8N196 739 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TTLL6Q8N841 843 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TBCCD1Q9NVR7 557 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 KANSL1LA0AUZ9 987 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SIGLEC16A6NMB1 481 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SFI1A8K8P3 1242 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 CES2O00748 559 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TBCAO75347 108 aaKnown RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 EYA4O95677 639 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SERPING1P05155 500 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 CSE1LP55060 971 aaKnown RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 ARID5AQ03989 594 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.43■□□□□ 0.22
FXN-201ENST00000377270 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 OTOP1Q7RTM1 612 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SCAIQ8N9R8 606 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 GMLQ99445 158 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 LRRC4CQ9HCJ2 640 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 FAIMQ9NVQ4 179 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
FXN-201ENST00000377270 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
FXN-201ENST00000377270 GCNT3O95395 438 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 ARFIP2P53365 341 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 MSLNQ13421 630 aaPredicted RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 RAPGEF1Q13905 1077 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 GPR162Q16538 588 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 TMEM259Q4ZIN3 620 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms