RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 BANF1O75531 89 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 GTF2H1P32780 548 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 C1orf131Q8NDD1 294 aaKnown RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 TLCD1Q96CP7 247 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 RBM15Q96T37 977 aaKnown RBP eCLIP13.73□□□□□ -0.21
USP11-204ENST00000377107 GMLQ99445 158 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 CCT8L1PA6NM43 557 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 SNCBQ16143 134 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 ATL2Q8NHH9 583 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 ZNF302Q9NR11 478 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 CNOT7Q9UIV1 285 aaKnown RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 FSBPO95073 299 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 RXRBP28702 533 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 GMPSP49915 693 aaPredicted RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 NCOA4Q13772 614 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 FAM83AQ86UY5 434 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 CYP4X1Q8N118 509 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 TMEM130Q8N3G9 435 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 GIMAP7Q8NHV1 300 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 LBHD1Q9BQE6 289 aaPredicted RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
USP11-204ENST00000377107 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
USP11-204ENST00000377107 F8VP50 259 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 GOLGA8RI6L899 631 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 GGPS1O95749 300 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 NUDT17P0C025 328 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 TNFSF9P41273 254 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 FNTAP49354 379 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 ARSEP51690 589 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 DNAJC24Q6P3W2 148 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 RHOT1Q8IXI2 618 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 GRK7Q8WTQ7 553 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 SEC14L1Q92503 715 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 ART4Q93070 314 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 KLF6Q99612 283 aaPredicted RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 NUB1Q9Y5A7 615 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 DRP2Q13474 957 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 CNPY4Q8N129 248 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 PGM2Q96G03 612 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 INO80BQ9C086 356 aaPredicted RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 MTMR12Q9C0I1 747 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 EIF4E1BA6NMX2 242 aaKnown RBP13.72□□□□□ -0.21
USP11-204ENST00000377107 GJB1P08034 283 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 MMP13P45452 471 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 BPIFB4P59827 614 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 CUL2Q13617 745 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 ZNF280CQ8ND82 737 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 KIF9Q9HAQ2 790 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
USP11-204ENST00000377107 EXTL3O43909 919 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 UBOX5O94941 541 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 MAP3K6O95382 1288 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 ITIH2P19823 946 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 GBP1P32455 592 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 CNGA2Q16280 664 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 KIRREL3Q8IZU9 778 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 DDX1Q92499 740 aaKnown RBP13.71□□□□□ -0.21
USP11-204ENST00000377107 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 ACTR5Q9H9F9 607 aaPredicted RBP13.71□□□□□ -0.21
USP11-204ENST00000377107 APOBEC3GQ9HC16 384 aaKnown RBP13.71□□□□□ -0.21
USP11-204ENST00000377107 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP11-204ENST00000377107 TTC4O95801 387 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 CPP00450 1065 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 CST3P01034 146 aaPredicted RBP13.71□□□□□ -0.21
USP11-204ENST00000377107 BACE1P56817 501 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 TMEM132BQ14DG7 1078 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 CD101Q93033 1021 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
USP11-204ENST00000377107 NINJ2Q9NZG7 142 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
USP11-204ENST00000377107 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 DKC1O60832 514 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP11-204ENST00000377107 PROSCO94903 275 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 MYL6P60660 151 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 SP2Q02086 613 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 MFSD7Q6UXD7 560 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms