RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 PCDHB2Q9Y5E7 798 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CYP3A7-CYP3A51PA0A087WV96 503 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CYP3A7P24462 503 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CYP24A1Q07973 514 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 GIMAP7Q8NHV1 300 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 RILPQ96NA2 401 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CEP41Q9BYV8 373 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 SLC13A1Q9BZW2 595 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 DHX35Q9H5Z1 703 aaKnown RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CHST7Q9NS84 486 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 TIMM13Q9Y5L4 95 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 EDIL3O43854 480 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 C6orf222P0C671 652 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 GLE1Q53GS7 698 aaKnown RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 IL31Q6EBC2 164 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 WDR93Q6P2C0 686 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 TEX2Q8IWB9 1127 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 C4orf19Q8IY42 314 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 TMEM161BQ8NDZ6 487 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CCDC110Q8TBZ0 833 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 AGR3Q8TD06 166 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 TMEM121Q9BTD3 319 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 DDX23Q9BUQ8 820 aaKnown RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CST8O60676 142 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
HDAC6-203ENST00000376619 KITP10721 976 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 AKAP5P24588 427 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 EPHX2P34913 555 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 ITGA8P53708 1063 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CCL15Q16663 113 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CDCA5Q96FF9 252 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 CCT8L2Q96SF2 557 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 INTUQ9ULD6 942 aa11.8□□□□□ -0.52
HDAC6-203ENST00000376619 A6NJR5 290 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ETS1P14921 441 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PDGFRAP16234 1089 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 LSP1P33241 339 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RPL7AP62424 266 aaKnown RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ITKQ08881 620 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 SETDB1Q15047 1291 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 HASPINQ8TF76 798 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 F8VP50 259 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PPP1R37O75864 691 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 INSRRP14616 1297 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 KCNA3P22001 575 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 IFI35P80217 286 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CUL2Q13617 745 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 SLC13A5Q86YT5 568 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RHOT1Q8IXI2 618 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 HNRNPLLQ8WVV9 542 aaKnown RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RBM15Q96T37 977 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CCDC195A0A1B0GUA6 201 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 MCF2LO15068 1137 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RARAP10276 462 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CHN1P15882 459 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ADCYAP1R1P41586 468 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PPP2R2AP63151 447 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CDR2Q01850 454 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RCN2Q14257 317 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PLCB4Q15147 1175 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 APBB1IPQ7Z5R6 666 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 NLRP14Q86W24 1093 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 KREMEN1Q96MU8 473 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 OSMRQ99650 979 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ANKEF1Q9NU02 776 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 FIS1Q9Y3D6 152 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PHKA2P46019 1235 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 ITIH3Q06033 890 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-203ENST00000376619 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 DUOX1Q9NRD9 1551 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CISHQ9NSE2 258 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 CTNNAL1Q9UBT7 734 aa11.79□□□□□ -0.52
HDAC6-203ENST00000376619 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms