RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 MYL6P60660 151 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 SOX4Q06945 474 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-202ENST00000376237 DPY19L2P1Q6NXN4 242 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PPFIBP1Q86W92 1011 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PHOSPHO2Q8TCD6 241 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PDLIM2Q96JY6 352 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 FAM193BQ96PV7 902 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-202ENST00000376237 SIX2Q9NPC8 291 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PAX3P23760 479 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 ZNF699Q32M78 642 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 HPDLQ96IR7 371 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 ZNF560Q96MR9 790 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 XYLT2Q9H1B5 865 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PCDH10Q9P2E7 1040 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 A0A1W2PQJ5 194 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 TBKBP1A7MCY6 615 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 UCHL3P15374 230 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 NOP14P78316 857 aaKnown RBP24.65■■□□□ 1.54
HLA-C-202ENST00000376237 DSC1Q08554 894 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 PHLDB3Q6NSJ2 640 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 LRRC43Q8N309 656 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 ZNF689Q96CS4 500 aaPredicted RBP24.65■■□□□ 1.54
HLA-C-202ENST00000376237 SLC9A7Q96T83 725 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 PI4K2AQ9BTU6 479 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 TTYH3Q9C0H2 523 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 GOLGA2P5Q9HBQ8 144 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 CEP72Q9P209 647 aa24.65■■□□□ 1.54
HLA-C-202ENST00000376237 LRRN2O75325 713 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 NOL4O94818 638 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 GCNT1Q02742 428 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 CCDC173Q0VFZ6 552 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 TBX2Q13207 712 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-202ENST00000376237 SMYD5Q6GMV2 418 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 ENOSF1Q7L5Y1 443 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 ZNF397Q8NF99 534 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-202ENST00000376237 GANQ9H2C0 597 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 CAPN11Q9UMQ6 739 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 SLC4A7Q9Y6M7 1214 aa24.64■■□□□ 1.53
HLA-C-202ENST00000376237 P4HA1P13674 534 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 TBXAS1P24557 533 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-202ENST00000376237 MAGEA10P43363 369 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-202ENST00000376237 LRMPQ12912 555 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 UPP1Q16831 310 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 ZNF667Q5HYK9 610 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 CACNA2D4Q7Z3S7 1137 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 COLGALT2Q8IYK4 626 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 PPM1KQ8N3J5 372 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 JAKMIP2Q96AA8 810 aa24.63■■□□□ 1.53
HLA-C-202ENST00000376237 UBE2TQ9NPD8 197 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-202ENST00000376237 PDCD11Q14690 1871 aaKnown RBP24.63■■□□□ 1.53
HLA-C-202ENST00000376237 TRIP11Q15643 1979 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 PODXLO00592 558 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 DDHD2O94830 711 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 CLSTN1O94985 981 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 GJB5O95377 273 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 GYPCP04921 128 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 TAF6P49848 677 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 GATMP50440 423 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 CLCNKBP51801 687 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 MFAP3P55082 362 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 POLR2FP61218 127 aaKnown RBP24.62■■□□□ 1.53
HLA-C-202ENST00000376237 WDR72Q3MJ13 1102 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 SV2CQ496J9 727 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 DCLRE1AQ6PJP8 1040 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 ZNF280BQ86YH2 543 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 CMTR2Q8IYT2 770 aaKnown RBP24.62■■□□□ 1.53
HLA-C-202ENST00000376237 SPC24Q8NBT2 197 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 TMEM175Q9BSA9 504 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 CXXC1Q9P0U4 656 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-202ENST00000376237 LUC7L2Q9Y383 392 aaKnown RBP24.62■■□□□ 1.53
HLA-C-202ENST00000376237 NUB1Q9Y5A7 615 aa24.62■■□□□ 1.53
HLA-C-202ENST00000376237 CARNS1A5YM72 827 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 CASTOR2A6NHX0 329 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 EPHB6O15197 1021 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 RGS19P49795 217 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 RASIP1Q5U651 963 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 SCARA3Q6AZY7 606 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 TATDN2Q93075 761 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 NAA15Q9BXJ9 866 aaKnown RBP24.61■■□□□ 1.53
HLA-C-202ENST00000376237 NIF3L1Q9GZT8 377 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 NUCKS1Q9H1E3 243 aaKnown RBP24.61■■□□□ 1.53
HLA-C-202ENST00000376237 NRDE2Q9H7Z3 1164 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 RC3H2Q9HBD1 1191 aaKnown RBP24.61■■□□□ 1.53
HLA-C-202ENST00000376237 APOBEC3GQ9HC16 384 aaKnown RBP24.61■■□□□ 1.53
HLA-C-202ENST00000376237 DNAJC12Q9UKB3 198 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 MYO6Q9UM54 1294 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 ALDH2P05091 517 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 LILRA4P59901 499 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 ZBED6P86452 979 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 APBA1Q02410 837 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 SPOPLQ6IQ16 392 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 CNGA4Q8IV77 575 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 ARHGEF19Q8IW93 802 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 PPP1R9BQ96SB3 815 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 YME1L1Q96TA2 773 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 STK33Q9BYT3 514 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 FAM124BQ9H5Z6 455 aaPredicted RBP24.61■■□□□ 1.53
HLA-C-202ENST00000376237 GDAP2Q9NXN4 497 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 FHOD1Q9Y613 1164 aa24.61■■□□□ 1.53
HLA-C-202ENST00000376237 KPNA7A9QM74 516 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms