RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MGAT5Q09328 741 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 THEMIS2Q5TEJ8 643 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 SCYL2Q6P3W7 929 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ARHGEF18Q6ZSZ5 1173 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PGM2Q96G03 612 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 SRGAP2CP0DJJ0 459 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ALCAMQ13740 583 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 ADSSP30520 456 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 GNA15P30679 374 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 WNT7BP56706 349 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 RPS6P62753 249 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 KDSRQ06136 332 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 SLC1A5Q15758 541 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 C11orf63Q6NUN7 778 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 MFSD7Q6UXD7 560 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 ARMC9Q7Z3E5 817 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 TRIM56Q9BRZ2 755 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 ACSS2Q9NR19 701 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 NCANO14594 1321 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 STRN3Q13033 797 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 TFDP1Q14186 410 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 RFWD3Q6PCD5 774 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 THNSL1Q8IYQ7 743 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 PACSIN3Q9UKS6 424 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 WNK3Q9BYP7 1800 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 POLRMTO00411 1230 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 MGRN1O60291 552 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 P4HBP07237 508 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 NUDT17P0C025 328 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 CETN2P41208 172 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 WDR4P57081 412 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 CDR2Q01850 454 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 KIF22Q14807 665 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 ZNF395Q9H8N7 513 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-202ENST00000375597 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 ZFP69BQ9UJL9 534 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
MCF2L-202ENST00000375597 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 RREB1Q92766 1687 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 SMIM24O75264 130 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 AVILO75366 819 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 DSG3P32926 999 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 PPP2R5CQ13362 524 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 NLRX1Q86UT6 975 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 ART4Q93070 314 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 TTC1Q99614 292 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 EHMT1Q9H9B1 1298 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 SYNJ2BP-COX16A0A087WUM0 186 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.413e-6■□□□□ 9
MCF2L-202ENST00000375597 HLA-DRAP01903 254 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 ZCCHC18P0CG32 403 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 CYP3A7P24462 503 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 RAP1GAPP47736 663 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 PIGWQ7Z7B1 504 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 TTC7BQ86TV6 843 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 WNK4Q96J92 1243 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 DONSONQ9NYP3 566 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 COX16Q9P0S2 106 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 NOCTQ9UK39 431 aaKnown RBP12.48□□□□□ -0.41
MCF2L-202ENST00000375597 PCDHA3Q9Y5H8 950 aa12.48□□□□□ -0.41
MCF2L-202ENST00000375597 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms