RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 MCF2LO15068 1137 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 GYG2O15488 501 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 PAEPP09466 180 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 FMO1Q01740 532 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 HIF1AQ16665 826 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 CLEC16AQ2KHT3 1053 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
CUL4A-203ENST00000375441 CAPRIN2Q6IMN6 1127 aaKnown RBP13.92□□□□□ -0.18
CUL4A-203ENST00000375441 MIS18BP1Q6P0N0 1132 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 CASC4Q6P4E1 433 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 FAM71AQ8IYT1 594 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
CUL4A-203ENST00000375441 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 HAO1Q9UJM8 370 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 SMG5Q9UPR3 1016 aaKnown RBP13.92□□□□□ -0.18
CUL4A-203ENST00000375441 MAD1L1Q9Y6D9 718 aa13.92□□□□□ -0.18
CUL4A-203ENST00000375441 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 FOXO6A8MYZ6 492 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 EDIL3O43854 480 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 TNNC2P02585 160 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 KRT81Q14533 505 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 SLFN12LQ6IEE8 588 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 DARS2Q6PI48 645 aaKnown RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 C6orf89Q6UWU4 347 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 ZDHHC24Q6UX98 284 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 CCDC110Q8TBZ0 833 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 GRHL1Q9NZI5 618 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 SENP1Q9P0U3 644 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 SNRPFP62306 86 aaKnown RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 NFX1Q12986 1120 aaKnown RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 MCOLN2Q8IZK6 566 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 MAML1Q92585 1016 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 SENP7Q9BQF6 1050 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 O00370 1275 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 HAUS5O94927 633 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 CALB1P05937 261 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 ADRB2P07550 413 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 PTGIRP43119 386 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
CUL4A-203ENST00000375441 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 AGAP11Q8TF27 550 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 UBN1Q9NPG3 1134 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
CUL4A-203ENST00000375441 C5orf60A6NFR6 353 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SMIM24O75264 130 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 RPS6P62753 249 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 NOP14P78316 857 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 AGGF1Q8N302 714 aaeCLIP13.9□□□□□ -0.186e-10■■■■■ 30.6
CUL4A-203ENST00000375441 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 HSPH1Q92598 858 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 TMEM143Q96AN5 459 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 MCEEQ96PE7 176 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 BATF3Q9NR55 127 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SLIT2O94813 1529 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 CACNA1SQ13698 1873 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 PROSCO94903 275 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 CRYMQ14894 314 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 LVRNQ6Q4G3 990 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 LRRC19Q9H756 370 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 ZNF70Q9UC06 446 aaPredicted RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
CUL4A-203ENST00000375441 CCNG2Q16589 344 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SYCP2LQ5T4T6 812 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 FEZF2Q8TBJ5 459 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 FAM151AQ8WW52 585 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 CKAP2Q8WWK9 683 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 SHC3Q92529 594 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 FAM84AQ96KN4 292 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 USP20Q9Y2K6 914 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 GLI3P10071 1580 aa13.9□□□□□ -0.18
CUL4A-203ENST00000375441 IGLV3-22A0A075B6J6 115 aa13.89□□□□□ -0.19
CUL4A-203ENST00000375441 IQANK1A0A1B0GTG1 560 aa13.89□□□□□ -0.19
CUL4A-203ENST00000375441 DGAT1O75907 488 aa13.89□□□□□ -0.19
CUL4A-203ENST00000375441 CYP1A2P05177 515 aa13.89□□□□□ -0.19
CUL4A-203ENST00000375441 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms