RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GPATCH11Q8N954 259 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 SYN2Q92777 582 aaPredicted RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 NCAPGQ9BPX3 1015 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 G3BP2Q9UN86 482 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 SUN1O94901 812 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 STAG3L1P0CL83 205 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 GLB1LQ6UWU2 654 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 SLC47A2Q86VL8 602 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 PPFIBP2Q8ND30 876 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 DEPDC1BQ8WUY9 529 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 AGAP3Q96P47 875 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 OSBPL8Q9BZF1 889 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 DBR1Q9UK59 544 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 ARHGAP42A6NI28 874 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 MAP3K6O95382 1288 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 CYP2C19P33261 490 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 CARSP49589 748 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 FCGRTP55899 365 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 ADCY2Q08462 1091 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 ZNF484Q5JVG2 852 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 MPZL3Q6UWV2 235 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 CYFIP2Q96F07 1278 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 C9orf72Q96LT7 481 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 MMTAG2Q9BU76 263 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 C17orf102A2RUQ5 167 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 KBTBD13C9JR72 458 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 CYP3A4P08684 503 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 CYP11B1P15538 503 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 GNL1P36915 607 aaPredicted RBP18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 FAM47EQ6ZV65 393 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 ACOT1Q86TX2 421 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 PPM1EQ8WY54 764 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 DPP3Q9NY33 737 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 TRAF3IP3Q9Y228 551 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 XRN1Q8IZH2 1706 aaKnown RBP18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 CYP24A1Q07973 514 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 FIGNQ5HY92 759 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 CCDC197Q8NCU1 140 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 ATL2Q8NHH9 583 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 CD4P01730 458 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 HMBSP08397 361 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 SLC1A1P43005 524 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 OAZ1P54368 228 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 KIAA1755Q5JYT7 1200 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 TACO1Q9BSH4 297 aaKnown RBP18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 HMGB1P1B2RPK0 211 aaPredicted RBP18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 RAD51CO43502 376 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 KLRC4O43908 158 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 GMNNO75496 209 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 UBA1P22314 1058 aaKnown RBP18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 ROR1Q01973 937 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 RCN2Q14257 317 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 DCAF6Q58WW2 860 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 EXOC4Q96A65 974 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 TTC17Q96AE7 1141 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 RIPK3Q9Y572 518 aa18.97■□□□□ 0.63
PTPDC1-202ENST00000375360 FAM187AA6NFU0 413 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 F8VZ95 297 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 CDK17Q00537 523 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 SPATA2LQ8IUW3 424 aaPredicted RBP18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 TPCN2Q8NHX9 752 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 DDX56Q9NY93 547 aaKnown RBP18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 TBC1D12O60347 775 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 DLK2Q6UY11 383 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 ANKMY2Q8IV38 441 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 KLRG1Q96E93 195 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 WDR35Q9P2L0 1181 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 RRM1P23921 792 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 DNAJC19Q96DA6 116 aa18.96■□□□□ 0.63
PTPDC1-202ENST00000375360 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 PFDN6O15212 129 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 RAP1GAPP47736 663 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 CDR2Q01850 454 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 TAP1Q03518 808 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 ECM1Q16610 540 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 GTF3C4Q9UKN8 822 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 CCDC78A2IDD5 438 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 CST8O60676 142 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 GPC4O75487 556 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 TFRCP02786 760 aaKnown RBP18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 APRTP07741 180 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 PMLP29590 882 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 DNAJB3Q8WWF6 145 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 HDAC11Q96DB2 347 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 ANKRD63C9JTQ0 380 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 TRAPPC3O43617 180 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 LRRC14Q15048 493 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 KCNT1Q5JUK3 1230 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 USP50Q70EL3 339 aaPredicted RBP18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 RNF180Q86T96 592 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 TNFRSF25Q93038 417 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 FSD1LQ9BXM9 530 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 IKZF4Q9H2S9 585 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 SULT1E1P49888 294 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms