RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PPP1R2P3Q6NXS1 205 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 CNPY4Q8N129 248 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 PABPC3Q9H361 631 aaKnown RBP6.9□□□□□ -1.3
SMC1A-202ENST00000375340 UVRAGQ9P2Y5 699 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 EPS15L1Q9UBC2 864 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 TBX20Q9UMR3 447 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 DUOX1Q9NRD9 1551 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 FAM86B1E9PN63 330 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 H3BRJ5 948 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 GIPC1O14908 333 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 NVLO15381 856 aaKnown RBP6.9□□□□□ -1.3
SMC1A-202ENST00000375340 RIPK2O43353 540 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 FAM86B2P0C5J1 330 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 KCNA3P22001 575 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 SFNP31947 248 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 THOC5Q13769 683 aaKnown RBP6.9□□□□□ -1.3
SMC1A-202ENST00000375340 Q4G0T1 1027 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 SEMA4AQ9H3S1 761 aa6.9□□□□□ -1.3
SMC1A-202ENST00000375340 MEI4A8MW99 385 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 KIF1CO43896 1103 aaKnown RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 DGKIO75912 1065 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 CYP11B1P15538 503 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 CTCFP49711 727 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 NPEPPSP55786 919 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 KCTD2Q14681 263 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 KIF19Q2TAC6 998 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 C1orf131Q8NDD1 294 aaKnown RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 SLC4A9Q96Q91 983 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 FGFBP2Q9BYJ0 223 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 DHX35Q9H5Z1 703 aaKnown RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 TMEM8AQ9HCN3 771 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 LDHAP00338 332 aaKnown RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 KRT4P19013 534 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 FLT3P36888 993 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 DLG4P78352 724 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 PRKCEQ02156 737 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 NCOA4Q13772 614 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 DAB2IPQ5VWQ8 1189 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 ACAD10Q6JQN1 1059 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 RMDN2Q96LZ7 410 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 WRNIP1Q96S55 665 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 TLK1Q9UKI8 766 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 STRIP2Q9ULQ0 834 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 GJB6O95452 261 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 MX2P20592 715 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 FOXD4Q12950 439 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 MXRA8Q9BRK3 442 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 TRPC5Q9UL62 973 aaPredicted RBP6.9□□□□□ -1.31
SMC1A-202ENST00000375340 TRAF3IP3Q9Y228 551 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 BCL9O00512 1426 aa6.9□□□□□ -1.31
SMC1A-202ENST00000375340 KIF3CO14782 793 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 ANXA13P27216 316 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 RANBP1P43487 201 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 NT5C2P49902 561 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 RSPH3Q86UC2 560 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 MCPH1Q8NEM0 835 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 USP20Q9Y2K6 914 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 BIRC2Q13490 618 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CBWD6Q4V339 395 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 FIGNQ5HY92 759 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CBWD3Q5JTY5 395 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CBWD5Q5RIA9 395 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 C3orf62Q6ZUJ4 267 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 ESYT2A0FGR8 921 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 TBX3O15119 743 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 PAX7P23759 505 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 NSUN2Q08J23 767 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CHI3L2Q15782 390 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 SHCBP1LQ9BZQ2 653 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 TRIM33Q9UPN9 1127 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 MYH13Q9UKX3 1938 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 SPATA31A5Q5VU36 1347 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 SPATA31A7Q8IWB4 1347 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 MAP3K6O95382 1288 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 PYGMP11217 842 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 FAXCQ5TGI0 409 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 OSBPL8Q9BZF1 889 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 KLHL8Q9P2G9 620 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 NOD1Q9Y239 953 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 ZBTB12Q9Y330 459 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CNTNAP4Q9C0A0 1308 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 GEMIN4P57678 1058 aaKnown RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 STXBP2Q15833 593 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 ARHGAP27Q6ZUM4 889 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 FBXO25Q8TCJ0 367 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 DCPSQ96C86 337 aaKnown RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 TAAR1Q96RJ0 339 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 MRPL4Q9BYD3 311 aaKnown RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 MYLK2Q9H1R3 596 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 DDX4Q9NQI0 724 aaKnown RBP6.89□□□□□ -1.31
SMC1A-202ENST00000375340 CYP26B1Q9NR63 512 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 DFFAO00273 331 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 PJA2O43164 708 aa6.89□□□□□ -1.31
SMC1A-202ENST00000375340 BANF1O75531 89 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms