RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 ZSCAN18Q8TBC5 510 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-202ENST00000375271 TCEAL4Q96EI5 215 aa15.46■□□□□ 0.07
PTCH1-202ENST00000375271 GPR88Q9GZN0 384 aa15.46■□□□□ 0.07
PTCH1-202ENST00000375271 ZNF334Q9HCZ1 680 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-202ENST00000375271 NOL7Q9UMY1 257 aaKnown RBP15.46■□□□□ 0.07
PTCH1-202ENST00000375271 CACNA1BQ00975 2339 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-202ENST00000375271 ABLIM3O94929 683 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
PTCH1-202ENST00000375271 PEX3P56589 373 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 ANAPC15P60006 121 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 STRN3Q13033 797 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 ST3GAL2Q16842 350 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 PRSS36Q5K4E3 855 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 NT5DC1Q5TFE4 455 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 USP37Q86T82 979 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 DDX1Q92499 740 aaKnown RBP15.45■□□□□ 0.06
PTCH1-202ENST00000375271 NELL1Q92832 810 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 CDT1Q9H211 546 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 KMT5AQ9NQR1 393 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 AFF4Q9UHB7 1163 aaKnown RBP15.45■□□□□ 0.06
PTCH1-202ENST00000375271 FBXL5Q9UKA1 691 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 MAFFQ9ULX9 164 aa15.45■□□□□ 0.06
PTCH1-202ENST00000375271 GPR179Q6PRD1 2367 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 NOTCH4Q99466 2003 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 WNT7AO00755 349 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 MCF2P10911 925 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 FCARP24071 287 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 CCNE1P24864 410 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 VIPR2P41587 438 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 GUCY1B3Q02153 619 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 ZNF174Q15697 407 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 PPM1JQ5JR12 505 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 IL31Q6EBC2 164 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 VITQ6UXI7 678 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 CEP120Q8N960 986 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
PTCH1-202ENST00000375271 C8orf76Q96K31 380 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 POLD4Q9HCU8 107 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 TRPV5Q9NQA5 729 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 ANKFY1Q9P2R3 1169 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 LRWD1Q9UFC0 647 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 KIAA1024Q9UPX6 916 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.44■□□□□ 0.06
PTCH1-202ENST00000375271 TICRRQ7Z2Z1 1910 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 TRIP11Q15643 1979 aa15.44■□□□□ 0.06
PTCH1-202ENST00000375271 JAK2O60674 1132 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 KRT37O76014 449 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SEC24AO95486 1093 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 EDN1P05305 212 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 ADRB1P08588 477 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 CNR2P34972 360 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 EPHB3P54753 998 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 YWHAHQ04917 246 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SOX4Q06945 474 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 ME3Q16798 604 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 ARHGAP15Q53QZ3 475 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 HEATR6Q6AI08 1181 aaKnown RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 MPZL3Q6UWV2 235 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 MFSD6LQ8IWD5 586 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SPEM1Q8N4L4 309 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SNX29Q8TEQ0 813 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SUSD3Q96L08 255 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 C8orf33Q9H7E9 229 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 PARD6AQ9NPB6 346 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 SEMA4GQ9NTN9 838 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 DDX19AQ9NUU7 478 aaKnown RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
PTCH1-202ENST00000375271 RBM19Q9Y4C8 960 aaKnown RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-202ENST00000375271 HEPACAM2A8MVW5 462 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 CHURC1-FNTBB4DL54 471 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 SLC30A4O14863 429 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
PTCH1-202ENST00000375271 KCNE1P15382 129 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 GJA1P17302 382 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 FNTBP49356 437 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 SMTNP53814 917 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 SATB1Q01826 763 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 TEAD2Q15562 447 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 AASDHQ4L235 1098 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-202ENST00000375271 TTC38Q5R3I4 469 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 MAMSTRQ6ZN01 415 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 PRR23CQ6ZRP0 262 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 MAP4K3Q8IVH8 894 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 HS6ST3Q8IZP7 471 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 C12orf50Q8NA57 414 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-202ENST00000375271 DDX12PQ92771 950 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 GCNAQ96QF7 691 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 TARS2Q9BW92 718 aaKnown RBP15.42■□□□□ 0.06
PTCH1-202ENST00000375271 OXCT2Q9BYC2 517 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-202ENST00000375271 TMEM134Q9H6X4 195 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 CNTN3Q9P232 1028 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 PCDHB8Q9UN66 801 aa15.42■□□□□ 0.06
PTCH1-202ENST00000375271 YIPF1Q9Y548 306 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms