RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
UBR4-202ENST00000375224 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 GOLGA8KD6RF30 607 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 OGTO15294 1046 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 ARIH2O95376 493 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 PRKCBP05771 671 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 TXNP10599 105 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 CTNNA2P26232 953 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 RANBP1P43487 201 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 CARSP49589 748 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 PLCB4Q15147 1175 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 MOB2Q70IA6 237 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 CASKIN2Q8WXE0 1202 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 FGD4Q96M96 766 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 ZSWIM1Q9BR11 485 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 PI4K2AQ9BTU6 479 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 AP1M1Q9BXS5 423 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 PLEKHA4Q9H4M7 779 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 FAM114A2Q9NRY5 505 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.76□□□□□ -1.01
UBR4-202ENST00000375224 FAN1Q9Y2M0 1017 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 UTP11Q9Y3A2 253 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 CAPN7Q9Y6W3 813 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 SCN4AP35499 1836 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 GOLGA6CA6NDK9 693 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 MSCO60682 206 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 RNF40O75150 1001 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 GOLGA6DP0CG33 693 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 PAX3P23760 479 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 LAMC2Q13753 1193 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 DHX34Q14147 1143 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 MESDQ14696 234 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 PTPROQ16827 1216 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 HSDL1Q3SXM5 330 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 ZNF484Q5JVG2 852 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 LIN9Q5TKA1 542 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 DRAXINQ8NBI3 349 aaPredicted RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 GPRC5AQ8NFJ5 357 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 LRRC45Q96CN5 670 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 SPDL1Q96EA4 605 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 GDAP1L1Q96MZ0 367 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 ACO2Q99798 780 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 CCDC113Q9H0I3 377 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 GOLGA6AQ9NYA3 693 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 CNOT8Q9UFF9 292 aaKnown RBP8.76□□□□□ -1.01
UBR4-202ENST00000375224 TRPC6Q9Y210 931 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 CNTNAP2Q9UHC6 1331 aa8.76□□□□□ -1.01
UBR4-202ENST00000375224 FAM187AA6NFU0 413 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 GLTPD2A6NH11 291 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 SPOPO43791 374 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 SYF2O95926 243 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 CLTAP09496 248 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 YBX3P16989 372 aaKnown RBP eCLIP8.75□□□□□ -1.015e-9■■■■□ 24
UBR4-202ENST00000375224 GGCXP38435 758 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 PTENP60484 403 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 MRPS25P82663 173 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 MCL1Q07820 350 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 PPFIA1Q13136 1202 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 SNX1Q13596 522 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 CFAP58Q5T655 872 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 RNF149Q8NC42 400 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 VCPIP1Q96JH7 1222 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 HAPLN2Q9GZV7 340 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 VTA1Q9NP79 307 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 ERAP1Q9NZ08 941 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 RASAL2Q9UJF2 1139 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 MTUS1Q9ULD2 1270 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 PCDHB4Q9Y5E5 795 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 TMEM110-MUSTN1A8MSY1 372 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 VNN1O95497 513 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 SRGAP2CP0DJJ0 459 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 CETPP11597 493 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 COMTP21964 271 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 MARK3P27448 753 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 SLC1A1P43005 524 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 NSFP46459 744 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 NCOA4Q13772 614 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 HLTFQ14527 1009 aaKnown RBP eCLIP8.75□□□□□ -1.018e-7■□□□□ 10.6
UBR4-202ENST00000375224 EAPPQ56P03 285 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 LMBRD2Q68DH5 695 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 FBXO16Q8IX29 292 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 RSRC1Q96IZ7 334 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 IQCGQ9H095 443 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 DDX47Q9H0S4 455 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 CNTN6Q9UQ52 1028 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 PCDHA3Q9Y5H8 950 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 ENO4A6NNW6 628 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 ACKR2O00590 384 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 MAGEB2O15479 319 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 STRNO43815 780 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 GRIN3BO60391 1043 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 UNGP13051 313 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 CHRNA3P32297 505 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 GBP1P32455 592 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 CTNNA1P35221 906 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 GCLCP48506 637 aaPredicted RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 NOP14P78316 857 aaKnown RBP8.75□□□□□ -1.01
UBR4-202ENST00000375224 POU5F1BQ06416 359 aa8.75□□□□□ -1.01
UBR4-202ENST00000375224 DUOXA2Q1HG44 320 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms