RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TMEM161BQ8NDZ6 487 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 BSNDQ8WZ55 320 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NKD2Q969F2 451 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SUCLA2Q9P2R7 463 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EP300Q09472 2414 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 A0A1B0GTH6 734 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 N4BP3O15049 544 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PI15O43692 258 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 OFD1O75665 1012 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NPR3P17342 541 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 AOC1P19801 751 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NAMPTP43490 491 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MTIF2P46199 727 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RAB27AP51159 221 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CLCN4P51793 760 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CLCN5P51795 746 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 APTXQ7Z2E3 356 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZNF410Q86VK4 478 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SIX5Q8N196 739 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DEPTORQ8TB45 409 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PSPC1Q8WXF1 523 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KCNN1Q92952 543 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CNOT6LQ96LI5 555 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KLHL5Q96PQ7 755 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 VPS16Q9H269 839 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TMEM134Q9H6X4 195 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 K7ERI5 159 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 C2CD2LO14523 706 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CLIC2O15247 247 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DDHD2O94830 711 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NR3C1P04150 777 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PTMAP06454 111 aaKnown RBP11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CNPP09543 421 aaKnown RBP11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SKIP12755 728 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NR2F2P24468 414 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KLRC2P26717 231 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 AFF1P51825 1210 aaKnown RBP11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EFNA5P52803 228 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 LAMTOR4Q0VGL1 99 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TDGQ13569 410 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TFDP1Q14186 410 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 AGMOQ6ZNB7 445 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 OTOP3Q7RTS5 596 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PPFIBP1Q86W92 1011 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CCDC105Q8IYK2 499 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SPC24Q8NBT2 197 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 URGCPQ8TCY9 931 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RSPH1Q8WYR4 309 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TUBGCP2Q9BSJ2 902 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KCNK12Q9HB15 430 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 AGPAT3Q9NRZ7 376 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 AGPAT5Q9NUQ2 364 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TAB2Q9NYJ8 693 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ARHGAP28Q9P2N2 729 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 DUSP12Q9UNI6 340 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZNF292O60281 2723 aa11.87□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TDRD15B5MCY1 1934 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CARNS1A5YM72 827 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 LRRIQ4A6NIV6 560 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SRGAP2CP0DJJ0 459 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PSMC2P35998 433 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MARSP56192 900 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 FOXK2Q01167 660 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 STRN3Q13033 797 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CAPSQ13938 189 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ANGPT1Q15389 498 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 VSTM4Q8IW00 320 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 C12orf56Q8IXR9 622 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 PGBD4Q96DM1 585 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KIFC3Q9BVG8 833 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms