RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TNNC1P63316 161 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TFAMQ00059 246 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TRPC3Q13507 836 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CCNI2Q6ZMN8 369 aaPredicted RBP19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 HDXQ7Z353 690 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ASB7Q9H672 318 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 STIM2Q9P246 746 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NOC2LQ9Y3T9 749 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MBLAC1A4D2B0 266 aaPredicted RBP19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CAPN15O75808 1086 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CLUL1Q15846 466 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PTPROQ16827 1216 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PRAMEF19Q5SWL8 479 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SCARA3Q6AZY7 606 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CDR2LQ86X02 465 aaPredicted RBP19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TMEM192Q8IY95 271 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MCOLN2Q8IZK6 566 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TNS4Q8IZW8 715 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 KAT2BQ92831 832 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ZFYVE28Q9HCC9 887 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 DMGDHQ9UI17 866 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 A0A1B0GUA9 196 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CCDC188H7C350 402 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ATMINO43313 823 aaPredicted RBP19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CALCAP01258 141 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SMIM10L2AP0DMW4 78 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SMIM10L2BP0DMW5 78 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 OSTNP61366 133 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 VCPIP1Q96JH7 1222 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ADAMTS10Q9H324 1103 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SETD4Q9NVD3 440 aa19.24■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SMIM35A0A1B0GVV1 85 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 FAM155AB1AL88 458 aaPredicted RBP19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 HAS3O00219 553 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MEFVO15553 781 aaPredicted RBP19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ERLIN2O94905 339 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NSFP46459 744 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PLA2G4AP47712 749 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CPT1AP50416 773 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NOMO3P69849 1222 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SREBF2Q12772 1141 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PCBP1Q15365 356 aaKnown RBP eCLIP19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CCL14Q16627 93 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MON1BQ7L1V2 547 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 HDAC7Q8WUI4 952 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CD101Q93033 1021 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CPB2Q96IY4 423 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PPP1R16BQ96T49 567 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ZSWIM1Q9BR11 485 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 UBXN6Q9BZV1 441 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 WNT8AQ9H1J5 351 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TLL2Q9Y6L7 1015 aa19.23■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CASP8AP2Q9UKL3 1982 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 LACTBL1A8MY62 500 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CSDE1O75534 798 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 HSPA1AP0DMV8 641 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 HSPA1BP0DMV9 641 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CYP2C19P33261 490 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ASPAP45381 313 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 DCAF4L1Q3SXM0 396 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NT5DC4Q86YG4 428 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PHF13Q86YI8 300 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 UBL4BQ8N7F7 174 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SCLT1Q96NL6 688 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NAP1L3Q99457 506 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 VRTNQ9H8Y1 702 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CISHQ9NSE2 258 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SIX4Q9UIU6 781 aa19.22■□□□□ 0.67
HLA-DQB1-201ENST00000374943 FAM170AA1A519 330 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 THAP12O43422 761 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CLSTN1O94985 981 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NFICP08651 508 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 COMTP21964 271 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CTNNA2P26232 953 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ADAM17P78536 824 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MESDQ14696 234 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MFSD10Q14728 455 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NAA35Q5VZE5 725 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 C1orf127Q8N9H9 656 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CXorf38Q8TB03 319 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 AENQ8WTP8 325 aaKnown RBP19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CCDC102AQ96A19 550 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CYFIP2Q96F07 1278 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 KRT12Q99456 494 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ADPGKQ9BRR6 497 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MROH7Q68CQ1 1323 aa19.21■□□□□ 0.67
HLA-DQB1-201ENST00000374943 GPR32O75388 356 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ZMYND10O75800 440 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 LSM8O95777 96 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 CYP2B6P20813 491 aa19.2■□□□□ 0.66
HLA-DQB1-201ENST00000374943 ATICP31939 592 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms