RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HEMGNQ9BXL5 484 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
CCDC40-203ENST00000374877 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-203ENST00000374877 HAO1Q9UJM8 370 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 ANAPC7Q9UJX3 599 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 DDX39AO00148 427 aaKnown RBP11.79□□□□□ -0.52
CCDC40-203ENST00000374877 FSCN2O14926 492 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 LUC7L3O95232 432 aaKnown RBP11.79□□□□□ -0.52
CCDC40-203ENST00000374877 FMO1Q01740 532 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-203ENST00000374877 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 OSBPL1AQ9BXW6 950 aa11.79□□□□□ -0.52
CCDC40-203ENST00000374877 MAPK4P31152 587 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 ABL2P42684 1182 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 BACE1P56817 501 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 GRIK3Q13003 919 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 BLMHQ13867 455 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 PSPC1Q8WXF1 523 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 KREMEN1Q96MU8 473 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 H0Y3Z8 333 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 PSMD10O75832 226 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 CYP1A2P05177 515 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 IVDP26440 423 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 PCK1P35558 622 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 SKIV2L2P42285 1042 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 RAD23BP54727 409 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 ZNF365Q70YC5 407 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 SLC9A9Q8IVB4 645 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 ANKRD35Q8N283 1001 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 CCDC127Q96BQ5 260 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 GRAMD1AQ96CP6 724 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 LRRC37BQ96QE4 947 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 LXNQ9BS40 222 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 UVRAGQ9P2Y5 699 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 MYH11P35749 1972 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 ADGRA3Q8IWK6 1321 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 FAM47DPA6NHR8 397 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 FDX1P10109 184 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 WDR4P57081 412 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 PTK6Q13882 451 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 GRK7Q8WTQ7 553 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 MRRFQ96E11 262 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 HERPUD2Q9BSE4 406 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 TMEM117Q9H0C3 514 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
CCDC40-203ENST00000374877 SPATS2LQ9NUQ6 558 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 ZMYND8Q9ULU4 1186 aaPredicted RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 CORO1CQ9ULV4 474 aaPredicted RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 R3HDM2Q9Y2K5 976 aaKnown RBP11.78□□□□□ -0.52
CCDC40-203ENST00000374877 CALCAP01258 141 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 CYP11B1P15538 503 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 RRM1P23921 792 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 GJC1P36383 396 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 POLGP54098 1239 aaPredicted RBP11.77□□□□□ -0.52
CCDC40-203ENST00000374877 DAB2IPQ5VWQ8 1189 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 CAPN12Q6ZSI9 719 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 SLCO2A1Q92959 643 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.52
CCDC40-203ENST00000374877 RNPEPL1Q9HAU8 725 aa11.77□□□□□ -0.52
CCDC40-203ENST00000374877 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 MTMR2Q13614 643 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 SH3D19Q5HYK7 790 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 DAW1Q8N136 415 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 XXYLT1Q8NBI6 393 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 PLEKHO2Q8TD55 490 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 NUDCD1Q96RS6 583 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 SH2D3AQ9BRG2 576 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 DCLK3Q9C098 648 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 HSPBP1Q9NZL4 362 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 PHTF1Q9UMS5 762 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 SNCAIPQ9Y6H5 919 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 EME2A4GXA9 379 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 POC1B-GALNT4F8VUJ3 575 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 PDHA1P08559 390 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 CYP3A4P08684 503 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 KRT5P13647 590 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 MAN1A1P33908 653 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 MFAP3P55082 362 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 SPP2Q13103 211 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
CCDC40-203ENST00000374877 C2CD6Q53TS8 623 aa11.77□□□□□ -0.53
CCDC40-203ENST00000374877 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms