RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 DRC7Q8IY82 874 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 OR5B17Q8NGF7 314 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 KIF12Q96FN5 646 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 RPS6KC1Q96S38 1066 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 MTMR12Q9C0I1 747 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 RSAD1Q9HA92 442 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 UBN1Q9NPG3 1134 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 GIT1Q9Y2X7 761 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 DERAQ9Y315 318 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 ITIH6Q6UXX5 1313 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 PMM2O15305 246 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
PFDN6-201ENST00000374606 IKBKEQ14164 716 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 EXOC3L4Q17RC7 722 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 DUOXA2Q1HG44 320 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 TCTN1Q2MV58 587 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 ZACNQ401N2 412 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 SPECC1LQ69YQ0 1117 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 SV2AQ7L0J3 742 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 TMC6Q7Z403 805 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 ZNF598Q86UK7 904 aaKnown RBP18.89■□□□□ 0.61
PFDN6-201ENST00000374606 CACTINQ8WUQ7 758 aaKnown RBP18.89■□□□□ 0.61
PFDN6-201ENST00000374606 ZNF516Q92618 1163 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 FAM84AQ96KN4 292 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 TSPAN18Q96SJ8 248 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 CRACR2AQ9BSW2 395 aa18.89■□□□□ 0.61
PFDN6-201ENST00000374606 TRIP11Q15643 1979 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 MEIS3P2A8K0S8 358 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 ENPP3O14638 875 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 XPOTO43592 962 aaKnown RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 PHACTR2O75167 634 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 EOMESO95936 686 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 ALADP13716 330 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 XKR4Q5GH76 650 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 GLRA4Q5JXX5 417 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 TDRD10Q5VZ19 366 aaKnown RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 ALKAL1Q6UXT8 129 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 AGMOQ6ZNB7 445 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 C15orf39Q6ZRI6 1047 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 ZFP42Q96MM3 310 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 LSM14BQ9BX40 385 aaKnown RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
PFDN6-201ENST00000374606 TMEM161AQ9NX61 479 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 SIK3Q9Y2K2 1263 aa18.88■□□□□ 0.61
PFDN6-201ENST00000374606 GOLGA6L6A8MZA4 724 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 IL9P15248 144 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 KCNE1P15382 129 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 FAM189BP81408 668 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 EPC2Q52LR7 807 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 PTCRAQ6ISU1 281 aaPredicted RBP18.87■□□□□ 0.61
PFDN6-201ENST00000374606 BEST2Q8NFU1 509 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 TAS1R2Q8TE23 839 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 ZMAT2Q96NC0 199 aaKnown RBP18.87■□□□□ 0.61
PFDN6-201ENST00000374606 GAD1Q99259 594 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 INTS2Q9H0H0 1204 aaKnown RBP18.87■□□□□ 0.61
PFDN6-201ENST00000374606 CXCL16Q9H2A7 254 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 LRFN2Q9ULH4 789 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 UBQLN1Q9UMX0 589 aaKnown RBP18.87■□□□□ 0.61
PFDN6-201ENST00000374606 COQ4Q9Y3A0 265 aa18.87■□□□□ 0.61
PFDN6-201ENST00000374606 SMIM28A0A1B0GU29 152 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.86■□□□□ 0.61
PFDN6-201ENST00000374606 ARL5CA6NH57 179 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 CLSTN1O94985 981 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 HLA-DRAP01903 254 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 PON1P27169 355 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 KLK7P49862 253 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 KCNMA1Q12791 1236 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 TRIM14Q14142 442 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 PUS10Q3MIT2 529 aaKnown RBP18.86■□□□□ 0.61
PFDN6-201ENST00000374606 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 GLB1LQ6UWU2 654 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 TRAPPC11Q7Z392 1133 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 SPC24Q8NBT2 197 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 NEK11Q8NG66 645 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 IMPG2Q9BZV3 1241 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 FAM207AQ9NSI2 230 aaPredicted RBP18.86■□□□□ 0.61
PFDN6-201ENST00000374606 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 PCDHB7Q9Y5E2 793 aa18.86■□□□□ 0.61
PFDN6-201ENST00000374606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.86■□□□□ 0.612e-8■■□□□ 11.6
PFDN6-201ENST00000374606 TDRD15B5MCY1 1934 aaKnown RBP18.85■□□□□ 0.61
PFDN6-201ENST00000374606 PTGESO14684 152 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
PFDN6-201ENST00000374606 SLC9A1P19634 815 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 SCNN1GP51170 649 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 TRPC3Q13507 836 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 NCOA4Q13772 614 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 TRIM65Q6PJ69 517 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 NPAS4Q8IUM7 802 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
PFDN6-201ENST00000374606 IQCDQ96DY2 449 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms