RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BPIFB4P59827 614 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 PTENP60484 403 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 CLDN10P78369 228 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DR1Q01658 176 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 ZACNQ401N2 412 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 SEPT1Q8WYJ6 367 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 KRT35Q92764 455 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 RAB17Q9H0T7 212 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 EDNRBP24530 442 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 HSPA9P38646 679 aaKnown RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 FBXO16Q8IX29 292 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DDX1Q92499 740 aaKnown RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 GLG1Q92896 1179 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 BTBD6Q96KE9 485 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 PCYT2Q99447 389 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DPH5Q9H2P9 285 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 FAM114A2Q9NRY5 505 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 CNOT8Q9UFF9 292 aaKnown RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 PIGRP01833 764 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 C4BPAP04003 597 aaKnown RBP12.92□□□□□ -0.34
HMGCL-202ENST00000374487 HARSP12081 509 aaKnown RBP12.92□□□□□ -0.34
HMGCL-202ENST00000374487 CLEC16AQ2KHT3 1053 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 TDRD10Q5VZ19 366 aaKnown RBP12.92□□□□□ -0.34
HMGCL-202ENST00000374487 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 CRISPLD2Q9H0B8 497 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
HMGCL-202ENST00000374487 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
HMGCL-202ENST00000374487 MCM3APO60318 1980 aa12.92□□□□□ -0.34
HMGCL-202ENST00000374487 A0A0B4J269 797 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CLDN3O15551 220 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CALCAP01258 141 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ECHS1P30084 290 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 MARCKSL1P49006 195 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 RGS19P49795 217 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 TARBP2Q15633 366 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 KCTD16Q68DU8 428 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 AADACL2Q6P093 401 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CRELD2Q6UXH1 353 aaPredicted RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF677Q86XU0 584 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PIK3R5Q8WYR1 880 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 KCNN1Q92952 543 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CEP89Q96ST8 783 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 MAFO75444 373 aaPredicted RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ERLIN2O94905 339 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PGK1P00558 417 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 IVLP07476 585 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 MARK3P27448 753 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 PEX5P50542 639 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 WNT7BP56706 349 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CAPSQ13938 189 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 TTMPQ5BVD1 217 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 DNAJC21Q5F1R6 531 aaKnown RBP12.91□□□□□ -0.34
HMGCL-202ENST00000374487 SPOPLQ6IQ16 392 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ERVK-5Q9HDB9 667 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 MTUS1Q9ULD2 1270 aa12.91□□□□□ -0.34
HMGCL-202ENST00000374487 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 MYADML2A6NDP7 307 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 BHMG1C9JSJ3 638 aaPredicted RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 SEPT4O43236 478 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PYGMP11217 842 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CHRNA3P32297 505 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CTNNA1P35221 906 aaKnown RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 HSD17B3P37058 310 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 NSFP46459 744 aaKnown RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 EFNA5P52803 228 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 RWDD2BP57060 319 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms