RNA–Protein interactions for RNA: ENST00000373735.1

CTNNA3-202, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 1,083 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-202ENST00000373735 LONP2Q86WA8 852 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 LNX1Q8TBB1 728 aaPredicted RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 SLC7A14Q8TBB6 771 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 TCP11Q8WWU5 503 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 FAM3CQ92520 227 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 EIF2AQ9BY44 585 aaKnown RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 PLA2G2FQ9BZM2 168 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 TRIM6Q9C030 488 aaPredicted RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 CSRNP2Q9H175 543 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 DHX33Q9H6R0 707 aaKnown RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 BRD9Q9H8M2 597 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 LMAN1LQ9HAT1 526 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 AVENQ9NQS1 362 aaPredicted RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 DNMT3BQ9UBC3 853 aaKnown RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 MRPS23Q9Y3D9 190 aaKnown RBP9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 HES2Q9Y543 173 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 DOCK6Q96HP0 2047 aa9.15□□□□□ -0.94
CTNNA3-202ENST00000373735 CCDC196A0A1B0GTZ2 297 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 ADAMTS3O15072 1205 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 TSPAN1O60635 241 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 DKC1O60832 514 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 PAPSS2O95340 614 aaPredicted RBP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 ELAVL2Q12926 359 aaKnown RBP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 RAB33AQ14088 237 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 HSP90AA2PQ14568 343 aaPredicted RBP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 Q4G0T1 1027 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 FAM171A1Q5VUB5 890 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 PLA2G4FQ68DD2 849 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 TANGO2Q6ICL3 276 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 SPEM1Q8N4L4 309 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 C12orf50Q8NA57 414 aaPredicted RBP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 RNF149Q8NC42 400 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 GSTCDQ8NEC7 633 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 ING5Q8WYH8 240 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 IRF7Q92985 503 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 TMEM143Q96AN5 459 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 MCRS1Q96EZ8 462 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 CEP170P1Q96L14 293 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 TRMT61BQ9BVS5 477 aaKnown RBP9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 APOL6Q9BWW8 343 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 HCFC1R1Q9NWW0 138 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 BRPF3Q9ULD4 1205 aa9.14□□□□□ -0.95
CTNNA3-202ENST00000373735 CHURC1-FNTBB4DL54 471 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 EDIL3O43854 480 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 RHOP08100 348 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 CDC27P30260 824 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 FNTBP49356 437 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 MLLT6P55198 1093 aaPredicted RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 NPEPPSP55786 919 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 SATB1Q01826 763 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 TUSC3Q13454 348 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 C1orf228Q6PIY5 440 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 UNQ6494/PRO21346Q6UXR6 183 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 CEP68Q76N32 757 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 FERMT3Q86UX7 667 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 CEP57Q86XR8 500 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 CCDC148Q8NFR7 591 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 GJA10Q969M2 543 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 C22orf23Q9BZE7 217 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 LSG1Q9H089 658 aaKnown RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 NXF3Q9H4D5 531 aaKnown RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 ZFP14Q9HCL3 533 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 F5P12259 2224 aa9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 TDRD15B5MCY1 1934 aaKnown RBP9.13□□□□□ -0.95
CTNNA3-202ENST00000373735 CYP3A7-CYP3A51PA0A087WV96 503 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 KLF18A0A0U1RQI7 1052 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 TMEM8BA6NDV4 472 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 J3QL48 77 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 ST8SIA5O15466 376 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 ADAM12O43184 909 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 PRPF3O43395 683 aaKnown RBP9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 MICAL2O94851 1124 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 KCNK5O95279 499 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 ZNF806P0C7X5 589 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 CHRNB1P11230 501 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 PTPN2P17706 415 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 PSMC3P17980 439 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 FCARP24071 287 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 CYP3A7P24462 503 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 AKAP5P24588 427 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 HOXA6P31267 233 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 OR1D2P34982 312 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 PTENP60484 403 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 EXOSC10Q01780 885 aaKnown RBP9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 SRSF5Q13243 272 aaKnown RBP9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 TFDP1Q14186 410 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 LRRC32Q14392 662 aa9.12□□□□□ -0.95
CTNNA3-202ENST00000373735 MXD4Q14582 209 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms