RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MAMLD1Q13495 774 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 TADA2BQ86TJ2 420 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 CDR2LQ86X02 465 aaPredicted RBP25.38■■□□□ 1.65
CDK9-201ENST00000373264 NCAPG2Q86XI2 1143 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 PAGR1Q9BTK6 254 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 ADAM7Q9H2U9 754 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 ASIC3Q9UHC3 531 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 STAM2O75886 525 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 ICAM3P32942 547 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 RPL7AP62424 266 aaKnown RBP25.38■■□□□ 1.65
CDK9-201ENST00000373264 ADCY2Q08462 1091 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 EFCAB13Q8IY85 973 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 ABRAQ8N0Z2 381 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 LRRC71Q8N4P6 559 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 SELENOSQ9BQE4 189 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 KIAA1586Q9HCI6 787 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 MTRF1LQ9UGC7 380 aaKnown RBP25.38■■□□□ 1.65
CDK9-201ENST00000373264 IGKV6D-21A0A0A0MT36 114 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 ARIH2O95376 493 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 ACSL3O95573 720 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 SRGAP2CP0DJJ0 459 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 TCF7P36402 384 aaPredicted RBP25.37■■□□□ 1.65
CDK9-201ENST00000373264 FNTAP49354 379 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 EIF3BP55884 814 aaKnown RBP25.37■■□□□ 1.65
CDK9-201ENST00000373264 NCOA4Q13772 614 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 AVENQ9NQS1 362 aaPredicted RBP25.37■■□□□ 1.65
CDK9-201ENST00000373264 WDR90Q96KV7 1748 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 PGK2P07205 417 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 IFT88Q13099 833 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 TARBP2Q15633 366 aaKnown RBP25.37■■□□□ 1.65
CDK9-201ENST00000373264 LBX2Q6XYB7 198 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 KAT2BQ92831 832 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 CGRRF1Q99675 332 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 NIFKQ9BYG3 293 aaKnown RBP25.37■■□□□ 1.65
CDK9-201ENST00000373264 MTMR12Q9C0I1 747 aa25.37■■□□□ 1.65
CDK9-201ENST00000373264 PI4K2BG5E9Z4 385 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 H0YCG3 227 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 IVDP26440 423 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 STAT5BP51692 787 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 PTP4A2Q12974 167 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 CCDC114Q96M63 670 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 MTFR1LQ9H019 292 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 PROSCO94903 275 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 PIGRP01833 764 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 CHN1P15882 459 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 PDE4CQ08493 712 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 LONRF1Q17RB8 773 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 TRAPPC12Q8WVT3 735 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 ACSF2Q96CM8 615 aaPredicted RBP25.36■■□□□ 1.65
CDK9-201ENST00000373264 TCHPQ9BT92 498 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 DCLK3Q9C098 648 aa25.36■■□□□ 1.65
CDK9-201ENST00000373264 CDC42EP4Q9H3Q1 356 aaKnown RBP25.36■■□□□ 1.65
CDK9-201ENST00000373264 DDX20Q9UHI6 824 aaKnown RBP25.36■■□□□ 1.65
CDK9-201ENST00000373264 B4GALNT4Q76KP1 1039 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 HOOK3Q86VS8 718 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 DNERQ8NFT8 737 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 A0A087WUV0 522 aaPredicted RBP25.35■■□□□ 1.65
CDK9-201ENST00000373264 OSTNP61366 133 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 SPRED3Q2MJR0 410 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 SPDYCQ5MJ68 293 aa25.35■■□□□ 1.65
CDK9-201ENST00000373264 BBXQ8WY36 941 aaPredicted RBP25.35■■□□□ 1.65
CDK9-201ENST00000373264 RGS16O15492 202 aaPredicted RBP25.34■■□□□ 1.65
CDK9-201ENST00000373264 ADCY3O60266 1144 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 FAM189A1O60320 539 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 MYL6P60660 151 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 HSDL1Q3SXM5 330 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 GADL1Q6ZQY3 521 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 ZNF677Q86XU0 584 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 CHST13Q8NET6 341 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 TSPYL1Q9H0U9 437 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 CTNNAL1Q9UBT7 734 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 SIP14410 1827 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 TLR3O15455 904 aaKnown RBP25.34■■□□□ 1.65
CDK9-201ENST00000373264 RARGP13631 454 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 KRT10P13645 584 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 CREB1P16220 341 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 BRD2P25440 801 aaKnown RBP25.34■■□□□ 1.65
CDK9-201ENST00000373264 ITGA8P53708 1063 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 CALCOCO2Q13137 446 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 BYSLQ13895 437 aaKnown RBP25.34■■□□□ 1.65
CDK9-201ENST00000373264 RNF187Q5TA31 235 aaPredicted RBP25.34■■□□□ 1.65
CDK9-201ENST00000373264 SLFN12LQ6IEE8 588 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 SCARA5Q6ZMJ2 495 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 ZNF606Q8WXB4 792 aa25.34■■□□□ 1.65
CDK9-201ENST00000373264 ADM5C9JUS6 153 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 MEFVO15553 781 aaPredicted RBP25.33■■□□□ 1.65
CDK9-201ENST00000373264 BPIFB4P59827 614 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 NOL9Q5SY16 702 aaKnown RBP25.33■■□□□ 1.65
CDK9-201ENST00000373264 MOB2Q70IA6 237 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 PPM1EQ8WY54 764 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 CCDC113Q9H0I3 377 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 PARP2Q9UGN5 583 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 CD2APQ9Y5K6 639 aa25.33■■□□□ 1.65
CDK9-201ENST00000373264 MSCO60682 206 aa25.32■■□□□ 1.64
CDK9-201ENST00000373264 WEE2P0C1S8 567 aa25.32■■□□□ 1.64
CDK9-201ENST00000373264 KLF1Q13351 362 aaPredicted RBP25.32■■□□□ 1.64
CDK9-201ENST00000373264 AUHQ13825 339 aaKnown RBP25.32■■□□□ 1.64
CDK9-201ENST00000373264 TXNRD3NBQ6F5E7 133 aa25.32■■□□□ 1.64
CDK9-201ENST00000373264 CEP120Q8N960 986 aa25.32■■□□□ 1.64
CDK9-201ENST00000373264 PGM2Q96G03 612 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms