RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 FAM167AQ96KS9 214 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 MTMR12Q9C0I1 747 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 RBPJLQ9UBG7 517 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 NOP56O00567 594 aaKnown RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 TOM1L1O75674 476 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 SHBGP04278 402 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 PRKCBP05771 671 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 GJB1P08034 283 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 TBXAS1P24557 533 aaPredicted RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 EFNA5P52803 228 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 CELF3Q5SZQ8 465 aaKnown RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 UBAP2Q5T6F2 1119 aaKnown RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 C12orf50Q8NA57 414 aaPredicted RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 ACO2Q99798 780 aaKnown RBP19.97■□□□□ 0.79
USP49-202ENST00000373010 CNTN6Q9UQ52 1028 aa19.97■□□□□ 0.79
USP49-202ENST00000373010 DCDC2CA8MYV0 355 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 LSP1P33241 339 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 NF2P35240 595 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 IFFO1Q0D2I5 559 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 TTLL12Q14166 644 aaPredicted RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 SGO2Q562F6 1265 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 LIN9Q5TKA1 542 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 WDR78Q5VTH9 848 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 ATG4AQ8WYN0 398 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 DDX27Q96GQ7 796 aaKnown RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 LRRC19Q9H756 370 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 NOVA2Q9UNW9 492 aaKnown RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 A6NNZ2 444 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 ANKRD65E5RJM6 399 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 PROSCO94903 275 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 MDH1P40925 334 aaKnown RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 FNTAP49354 379 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 MYL6P60660 151 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 PLCB4Q15147 1175 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 TUBB8Q3ZCM7 444 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 CDCA2Q69YH5 1023 aaPredicted RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 TRIM72Q6ZMU5 477 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 RNF25Q96BH1 459 aaPredicted RBP19.96■□□□□ 0.79
USP49-202ENST00000373010 PLVAPQ9BX97 442 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 CHST7Q9NS84 486 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 RNF181Q9P0P0 153 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 AGTPBP1Q9UPW5 1226 aa19.96■□□□□ 0.79
USP49-202ENST00000373010 LGR5O75473 907 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 SLC25A27O95847 323 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 CD58P19256 250 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 SLC1A1P43005 524 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 MAMLD1Q13495 774 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 AGBL2Q5U5Z8 902 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 RHPN2Q8IUC4 686 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 PABPC3Q9H361 631 aaKnown RBP19.95■□□□□ 0.78
USP49-202ENST00000373010 PASKQ96RG2 1323 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 SPDYE5A6NIY4 337 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 CXCL11O14625 94 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 ABLIM1O14639 778 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 ECEL1O95672 775 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 ASS1P00966 412 aaKnown RBP19.95■□□□□ 0.78
USP49-202ENST00000373010 TAS2R40P59535 323 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 PTP4A2Q12974 167 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 PPP1R7Q15435 360 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 CDR2LQ86X02 465 aaPredicted RBP19.95■□□□□ 0.78
USP49-202ENST00000373010 PHF13Q86YI8 300 aaPredicted RBP19.95■□□□□ 0.78
USP49-202ENST00000373010 WDR49Q8IV35 697 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 ZBTB8OSQ8IWT0 167 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 DHX37Q8IY37 1157 aaKnown RBP19.95■□□□□ 0.78
USP49-202ENST00000373010 ANKRD13AQ8IZ07 590 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 UBR7Q8N806 425 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 ZNF606Q8WXB4 792 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 MMP19Q99542 508 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 IMPG2Q9BZV3 1241 aa19.95■□□□□ 0.78
USP49-202ENST00000373010 TULP2O00295 520 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 OGTO15294 1046 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 MAPK6Q16659 721 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 ODF2Q5BJF6 829 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 SPDYCQ5MJ68 293 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 TCP11Q8WWU5 503 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 RUNDC3BQ96NL0 473 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 HEMGNQ9BXL5 484 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 SEMA4AQ9H3S1 761 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 USTQ9Y2C2 406 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 IGKV6-21A0A0C4DH24 114 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 MYO1CO00159 1063 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 POTEJP0CG39 1038 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 GJC1P36383 396 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 ZNF132P52740 706 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 MAGOHP61326 146 aaKnown RBP19.94■□□□□ 0.78
USP49-202ENST00000373010 OSTNP61366 133 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 MXD4Q14582 209 aaPredicted RBP19.94■□□□□ 0.78
USP49-202ENST00000373010 KCTD2Q14681 263 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 ZNF394Q53GI3 561 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 UHMK1Q8TAS1 419 aaKnown RBP19.94■□□□□ 0.78
USP49-202ENST00000373010 ART4Q93070 314 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 CDCA5Q96FF9 252 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 PDGFCQ9NRA1 345 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 MTRF1LQ9UGC7 380 aaKnown RBP19.94■□□□□ 0.78
USP49-202ENST00000373010 PARP2Q9UGN5 583 aa19.94■□□□□ 0.78
USP49-202ENST00000373010 R3HDM2Q9Y2K5 976 aaKnown RBP19.94■□□□□ 0.78
USP49-202ENST00000373010 KRT17Q04695 432 aa19.93■□□□□ 0.78
USP49-202ENST00000373010 MOGSQ13724 837 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms