RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 AMACRQ9UHK6 382 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 TTI1O43156 1089 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 SLITRK3O94933 977 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 PLA2G4BP0C869 781 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 CYP11B2P19099 503 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP4AP20648 1035 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 PMS2P54278 862 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 HADHBP55084 474 aaKnown RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 NFIL3Q16649 462 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 KNOP1Q1ED39 458 aaKnown RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 C7orf31Q8N865 590 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 CCDC63Q8NA47 563 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 GLIS3Q8NEA6 775 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP8B4Q8TF62 1192 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 RFFLQ8WZ73 363 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ERP44Q9BS26 406 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 ZDHHC18Q9NUE0 388 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 MAFBQ9Y5Q3 323 aaPredicted RBP12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 EMSYQ7Z589 1322 aa12.25□□□□□ -0.45
TSPAN1-201ENST00000372003 HAS3O00219 553 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 PODXLO00592 558 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ZNF862O60290 1169 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ALADP13716 330 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 NR2F2P24468 414 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 FLT3P36888 993 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 STAT1P42224 750 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 QARSP47897 775 aaKnown RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ZNF131P52739 623 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 PSMC5P62195 406 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 IGBP1P78318 339 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 DR1Q01658 176 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ARID5AQ03989 594 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ZNF268Q14587 947 aaPredicted RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 TNFAIP8L3Q5GJ75 292 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 EPM2AIP1Q7L775 607 aaPredicted RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 CEP57Q86XR8 500 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 SLC30A5Q8TAD4 765 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ANKRD27Q96NW4 1050 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 HSD17B14Q9BPX1 270 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 LXNQ9BS40 222 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 NOD2Q9HC29 1040 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
TSPAN1-201ENST00000372003 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 TMEM150BA6NC51 233 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 ARVCFO00192 962 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 DDX3YO15523 660 aaKnown RBP12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 PQBP1O60828 265 aaKnown RBP12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 MED24O75448 989 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 MMEP08473 750 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SMIM10L2AP0DMW4 78 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SMIM10L2BP0DMW5 78 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 CHN1P15882 459 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 BRD2P25440 801 aaKnown RBP12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 PRKCEQ02156 737 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 ECM1Q16610 540 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SPRED3Q2MJR0 410 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 DENND2CQ68D51 928 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 CATSPER3Q86XQ3 398 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SCLT1Q96NL6 688 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 POLD4Q9HCU8 107 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 SIX2Q9NPC8 291 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP11BQ9Y2G3 1177 aa12.23□□□□□ -0.45
TSPAN1-201ENST00000372003 MIF4GDA9UHW6 222 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 DDX3XO00571 662 aaKnown RBP eCLIP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 ZBTB39O15060 712 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 SPATA31C1P0DKV0 1188 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 ITGA4P13612 1032 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 INSRRP14616 1297 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 SLC9A1P19634 815 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 CALRP27797 417 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 CHRNA3P32297 505 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 SLC26A2P50443 739 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PDE6CP51160 858 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 SLC12A3P55017 1021 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TRIM60Q495X7 471 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 MFSD5Q6N075 450 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TRPM8Q7Z2W7 1104 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 NELFCDQ8IXH7 590 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TRAPPC12Q8WVT3 735 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms