RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 IKZF4Q9H2S9 585 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 CYP4F11Q9HBI6 524 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 CEP72Q9P209 647 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 KCNH3Q9ULD8 1083 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 NUB1Q9Y5A7 615 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 INSL5Q9Y5Q6 135 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
RPF1-201ENST00000370654 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 NCANO14594 1321 aa14.36□□□□□ -0.11
RPF1-201ENST00000370654 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 TISP43B9A030 160 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 H3BQV1 296 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 PRRG1O14668 218 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 CLDN3O15551 220 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 GJA1P17302 382 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 ADCY1Q08828 1119 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 KARSQ15046 597 aaKnown RBP14.35□□□□□ -0.11
RPF1-201ENST00000370654 ARL6IP4Q66PJ3 421 aaKnown RBP14.35□□□□□ -0.11
RPF1-201ENST00000370654 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 MTSS1LQ765P7 747 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 TCEAL8Q8IYN2 117 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
RPF1-201ENST00000370654 LRG1P02750 347 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 SP9P0CG40 484 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 PTPN2P17706 415 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 CDR1P51861 262 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 SMTNP53814 917 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 GRM2Q14416 872 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 MLF2Q15773 248 aaPredicted RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 ENOX2Q16206 610 aaKnown RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 FAM78AQ5JUQ0 283 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 KIF12Q96FN5 646 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 AVENQ9NQS1 362 aaPredicted RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 TBX20Q9UMR3 447 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 KIF3AQ9Y496 699 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 KANSL1LA0AUZ9 987 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 H7C4K7 107 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 M0QZQ0 153 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 SPTLC1O15269 473 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 ECI2O75521 394 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 CLTAP09496 248 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 PLCG1P19174 1290 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 NMT1P30419 496 aaKnown RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 LRPAP1P30533 357 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 ELF1P32519 619 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPF1-201ENST00000370654 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPF1-201ENST00000370654 ZNF131P52739 623 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 TWF1Q12792 350 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
RPF1-201ENST00000370654 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 C1orf210Q8IVY1 113 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 BICD1Q96G01 975 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 PGLYRP2Q96PD5 576 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 TMEM209Q96SK2 561 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 KCND2Q9NZV8 630 aa14.34□□□□□ -0.11
RPF1-201ENST00000370654 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 K7ENM7 598 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 ADRB2P07550 413 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
RPF1-201ENST00000370654 LIG4P49917 911 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 FZD5Q13467 585 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 UBXN2BQ14CS0 331 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
RPF1-201ENST00000370654 ZNF280DQ6N043 979 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 GPIHBP1Q8IV16 184 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 BEST2Q8NFU1 509 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 RAD54LQ92698 747 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 KCNN1Q92952 543 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 LRRC3Q9BY71 257 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 HEBP1Q9NRV9 189 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 GDE1Q9NZC3 331 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 LARSQ9P2J5 1176 aaKnown RBP14.33□□□□□ -0.12
RPF1-201ENST00000370654 DAXXQ9UER7 740 aaPredicted RBP14.33□□□□□ -0.12
RPF1-201ENST00000370654 AFF4Q9UHB7 1163 aaKnown RBP14.33□□□□□ -0.12
RPF1-201ENST00000370654 CLIC4Q9Y696 253 aa14.33□□□□□ -0.12
RPF1-201ENST00000370654 MIA3Q5JRA6 1907 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 A0A0B4J269 797 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 OAZ2O95190 189 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 PIGRP01833 764 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 NFICP08651 508 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 UBA7P41226 1012 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 VIPR2P41587 438 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 TPGS2Q68CL5 300 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 SCARA3Q6AZY7 606 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
RPF1-201ENST00000370654 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 408.8 ms