RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 CACNG4Q9UBN1 327 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 PHACTR2O75167 634 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 EFEMP2O95967 443 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 C4BPAP04003 597 aaKnown RBP16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 KRT19P08727 400 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 POLR2BP30876 1174 aaKnown RBP16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 TAF6P49848 677 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 BMS1Q14692 1282 aaKnown RBP16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 KRT39Q6A163 491 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 FUT10Q6P4F1 479 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 SV2AQ7L0J3 742 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 C3orf58Q8NDZ4 430 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 CXorf38Q8TB03 319 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 BCL7CQ8WUZ0 217 aaPredicted RBP16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 RABGGTAQ92696 567 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
PRPF38B-202ENST00000370022 ARHGEF37A1IGU5 675 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 SOD2P04179 222 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 TRIM49P0CI25 452 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 TRIM49CP0CI26 452 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 EEF1GP26641 437 aaKnown RBP16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 AARSP49588 968 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■□□ 16.5
PRPF38B-202ENST00000370022 LILRA4P59901 499 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 MYO1EQ12965 1108 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 BIRC3Q13489 604 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 TRPC3Q13507 836 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 PTPROQ16827 1216 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 SV2CQ496J9 727 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 PDE12Q6L8Q7 609 aaKnown RBP16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 LRSAM1Q6UWE0 723 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 CD300LGQ6UXG3 332 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 IRF2BP1Q8IU81 584 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 RNF168Q8IYW5 571 aaPredicted RBP16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 POF1BQ8WVV4 589 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRPF38B-202ENST00000370022 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 F8W810 466 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 ATICP31939 592 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 GCLMP48507 274 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 ZNF445P59923 1031 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 GPR65Q8IYL9 337 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 HASPINQ8TF76 798 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 GDPD5Q8WTR4 605 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 HERC2P3Q9BVR0 1158 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 SSX2IPQ9Y2D8 614 aa16.74■□□□□ 0.27
PRPF38B-202ENST00000370022 BECN2A8MW95 431 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 KCNJ18B7U540 433 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 GRM6O15303 877 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 PMM2O15305 246 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 P4HA2O15460 535 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 MXI1P50539 228 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 KCNJ12Q14500 433 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 NCAPHQ15003 741 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 USP41Q3LFD5 358 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 TAF4BQ92750 862 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 HPDLQ96IR7 371 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 GPR62Q9BZJ7 368 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 NGRNQ9NPE2 291 aaKnown RBP16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
PRPF38B-202ENST00000370022 KPNA7A9QM74 516 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 M0QZQ0 153 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 PPEF2O14830 753 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 SYN3O14994 580 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 LPXNO60711 386 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 CST3P01034 146 aaPredicted RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 MTIF2P46199 727 aaKnown RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 CETN1Q12798 172 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 NCOA4Q13772 614 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TIGD5Q53EQ6 642 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 TCP11X2Q5H9J9 407 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 PDXDC1Q6P996 788 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 DSTYKQ6XUX3 929 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 ANKRD20A12PQ8NF67 263 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
PRPF38B-202ENST00000370022 MRPL38Q96DV4 380 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms