RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 NPTX2P47972 431 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ACADVLP49748 655 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 YARSP54577 528 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 PLTPP55058 493 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 IFRD2Q12894 506 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TBX2Q13207 712 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 PRKG1Q13976 671 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 HLTFQ14527 1009 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 BCL2A1Q16548 175 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 WHAMMP3Q1A5X7 153 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 STXBP5Q5T5C0 1151 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ALKBH5Q6P6C2 394 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CORO6Q6QEF8 472 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC149Q6ZUS6 474 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 SYDE1Q6ZW31 735 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 VSIG1Q86XK7 387 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 LRRC47Q8N1G4 583 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 NSUN7Q8NE18 718 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CEP70Q8NHQ1 597 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 FBXO27Q8NI29 283 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 MDM1Q8TC05 714 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 MAIP1Q8WWC4 291 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 DCTPP1Q9H773 170 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 PDE11AQ9HCR9 933 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 VCX3AQ9NNX9 186 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 SLC40A1Q9NP59 571 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TBCCD1Q9NVR7 557 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 EGFL7Q9UHF1 273 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TRHDEQ9UKU6 1024 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CCPG1Q9ULG6 757 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ZMYND8Q9ULU4 1186 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 HPCAL4Q9UM19 191 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TRAV6A0A075B6T7 132 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 MCF2LO15068 1137 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 GPR182O15218 404 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TLR3O15455 904 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 SLC7A4O43246 635 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ACSL4O60488 711 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CD2BP2O95400 341 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 GSTA2P09210 222 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 GHRP10912 638 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 KRT9P35527 623 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 HAAOP46952 286 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 RAB15P59190 212 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ACY1Q03154 408 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CBX3Q13185 183 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC153Q494R4 210 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 LACTB2Q53H82 288 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 MEI1Q5TIA1 1274 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CYB5D1Q6P9G0 228 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ABRAXAS1Q6UWZ7 409 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ATG9AQ7Z3C6 839 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TMC6Q7Z403 805 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ZBTB46Q86UZ6 589 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 MYCT1Q8N699 235 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 RNF139Q8WU17 664 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 RUBCNQ92622 972 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 HLA-CQ95604 372 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 VPS50Q96JG6 964 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 SLC26A6Q9BXS9 759 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 FAM192AQ9GZU8 254 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 UPF3AQ9H1J1 476 aaKnown RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 FAM204AQ9H8W3 233 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 IL23AQ9NPF7 189 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 TOPORSQ9NS56 1045 aaPredicted RBP5.41□□□□□ -1.54
UBE3D-202ENST00000369746 AIPL1Q9NZN9 384 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 ARHGAP28Q9P2N2 729 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 GABRQQ9UN88 632 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 DUSP12Q9UNI6 340 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 CARD8Q9Y2G2 431 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 SH3GLB1Q9Y371 365 aa5.41□□□□□ -1.54
UBE3D-202ENST00000369746 LRRD1A4D1F6 860 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 FSCN2O14926 492 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 RIMBP2O15034 1052 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SEC31AO94979 1220 aaKnown RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 TBX18O95935 607 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 KRT1P04264 644 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 ALOX15P16050 662 aaPredicted RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 ATP4AP20648 1035 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SULT1E1P49888 294 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 CPT1AP50416 773 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 IRAK1P51617 712 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 RELQ04864 619 aaPredicted RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 PPIDQ08752 370 aaKnown RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SPCS2Q15005 226 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 INTS11Q5TA45 600 aaKnown RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 KIAA0319Q5VV43 1072 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 FAM205BPQ63HN1 556 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SPATC1Q76KD6 591 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 GALNTL5Q7Z4T8 443 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 CEP97Q8IW35 865 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 FUKQ8N0W3 1084 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 EFCAB3Q8N7B9 438 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SYT2Q8N9I0 419 aaPredicted RBP5.4□□□□□ -1.54
UBE3D-202ENST00000369746 SSH3Q8TE77 659 aa5.4□□□□□ -1.54
UBE3D-202ENST00000369746 DIS3LQ8TF46 1054 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms